Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 SNORD118-201ENST00000363593 134 ntBASIC0.19□□□□□ -2.38
CCL28Q9NRJ3 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
CCL28Q9NRJ3 RNU6-469P-201ENST00000516253 101 ntBASIC0.19□□□□□ -2.38
CCL28Q9NRJ3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.54-201ENST00000362766 105 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.277-201ENST00000364754 102 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.292-201ENST00000364904 97 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.326-201ENST00000365176 113 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.396-201ENST00000383949 103 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 RNU6-42P-201ENST00000384165 107 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 U8.15-201ENST00000390947 134 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 RNA5SP127-201ENST00000411051 133 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 RNU6-765P-201ENST00000516916 99 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 MIR378D2-201ENST00000580636 98 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 MIR6082-201ENST00000613604 109 ntBASIC0.18□□□□□ -2.38
CCL28Q9NRJ3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.13-201ENST00000362403 112 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 RNU6-403P-201ENST00000363163 104 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 RNA5SP62-201ENST00000363457 110 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 RNU6-578P-201ENST00000390980 103 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 MIR548H3-201ENST00000408771 118 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 RNU6-863P-201ENST00000515989 104 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 SCARNA15-202ENST00000516881 127 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 AL117187.1-201ENST00000555482 181 ntBASIC0.17□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.145-201ENST00000363527 102 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 RNU6-949P-201ENST00000384040 107 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.515-201ENST00000384535 112 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 MIR624-201ENST00000385217 97 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 MIR1287-201ENST00000408492 90 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 RNU2-38P-201ENST00000410856 79 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 AL512326.2-201ENST00000426359 151 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 RNU6-893P-201ENST00000458841 100 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 RNU6-1149P-201ENST00000516810 97 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 MIR4711-201ENST00000578274 70 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 AC078938.1-201ENST00000620993 318 ntBASIC0.16□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.121-201ENST00000363309 113 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 SNORA36.1-201ENST00000363424 132 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 SNORA63-201ENST00000363450 132 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 SNORA18-201ENST00000384416 132 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 SNORA72.6-201ENST00000384520 129 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 MIR606-201ENST00000384851 96 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 MIR644A-201ENST00000385262 94 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 AC096949.1-201ENST00000412047 152 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 MIR4491-201ENST00000581087 68 ntBASIC0.15□□□□□ -2.39
CCL28Q9NRJ3 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.149-201ENST00000363558 117 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.238-201ENST00000364441 102 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 RNU4-16P-201ENST00000364737 141 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.288-201ENST00000364854 92 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.308-201ENST00000365043 101 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 RNU6-643P-201ENST00000384018 107 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 RNU6-493P-201ENST00000391321 108 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 RNU5E-9P-201ENST00000411164 104 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 MTND1P19-201ENST00000511780 315 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.797-201ENST00000515977 94 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 RNA5SP436-201ENST00000516020 115 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 RNY3P16-201ENST00000516338 101 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 RNU6-135P-201ENST00000516769 101 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 RNU2-4P-201ENST00000606190 192 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.812-201ENST00000610788 101 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.784-201ENST00000613803 101 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.787-201ENST00000616522 101 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.780-201ENST00000617336 101 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.801-201ENST00000619005 101 ntBASIC0.14□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.47-201ENST00000362697 108 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 RNY4P28-201ENST00000365281 93 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.562-201ENST00000384695 113 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 RNA5SP193-201ENST00000410353 107 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 RNU2-59P-201ENST00000410482 191 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 SNORD127-201ENST00000458892 86 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 SNORA31.14-201ENST00000516728 116 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 RNA5SP268-201ENST00000516828 124 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 AC008737.2-201ENST00000599446 118 ntBASIC0.13□□□□□ -2.39
CCL28Q9NRJ3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CCL28Q9NRJ3 RNY1P13-201ENST00000365030 105 ntBASIC0.12□□□□□ -2.39
CCL28Q9NRJ3 RNU6-1086P-201ENST00000410930 100 ntBASIC0.12□□□□□ -2.39
CCL28Q9NRJ3 AC073261.1-201ENST00000429409 121 ntBASIC0.12□□□□□ -2.39
CCL28Q9NRJ3 AC112693.2-201ENST00000556538 232 ntBASIC0.12□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.757-201ENST00000578934 114 ntBASIC0.12□□□□□ -2.39
CCL28Q9NRJ3 MIR6515-201ENST00000619843 57 ntBASIC0.12□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.116-201ENST00000363292 103 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 SNORA25.7-201ENST00000364375 127 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 RNY1P6-201ENST00000384193 109 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.539-201ENST00000384635 107 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 RNU6-291P-201ENST00000384720 107 ntBASIC0.11□□□□□ -2.39
CCL28Q9NRJ3 Y_RNA.571-201ENST00000384753 98 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms