Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 FAM71BP1-201ENST00000604431 523 ntBASIC1.05□□□□□ -2.24
DDX4Q9NQI0 AC104465.1-201ENST00000611365 139 ntBASIC1.05□□□□□ -2.24
DDX4Q9NQI0 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
DDX4Q9NQI0 SNORD113.3-201ENST00000364630 78 ntBASIC1.04□□□□□ -2.24
DDX4Q9NQI0 RNU4-11P-201ENST00000365287 132 ntBASIC1.04□□□□□ -2.24
DDX4Q9NQI0 RNY1P6-201ENST00000384193 109 ntBASIC1.04□□□□□ -2.24
DDX4Q9NQI0 RNU6-125P-201ENST00000384505 107 ntBASIC1.04□□□□□ -2.24
DDX4Q9NQI0 RNA5SP236-201ENST00000516169 116 ntBASIC1.04□□□□□ -2.24
DDX4Q9NQI0 AC011603.4-201ENST00000611325 277 ntBASIC1.04□□□□□ -2.24
DDX4Q9NQI0 MIR6717-201ENST00000622747 73 ntBASIC1.04□□□□□ -2.24
DDX4Q9NQI0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
DDX4Q9NQI0 RNU6-151P-201ENST00000364158 107 ntBASIC1.03□□□□□ -2.24
DDX4Q9NQI0 SNORA2B-201ENST00000384583 137 ntBASIC1.03□□□□□ -2.24
DDX4Q9NQI0 SNORA26.6-201ENST00000391256 115 ntBASIC1.03□□□□□ -2.24
DDX4Q9NQI0 MIR513C-201ENST00000401352 84 ntBASIC1.03□□□□□ -2.24
DDX4Q9NQI0 RNU6-602P-201ENST00000411155 105 ntBASIC1.03□□□□□ -2.24
DDX4Q9NQI0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.03□□□□□ -2.24
DDX4Q9NQI0 RNU6-1212P-201ENST00000517023 104 ntBASIC1.03□□□□□ -2.24
DDX4Q9NQI0 AC021613.1-201ENST00000623880 111 ntBASIC1.03□□□□□ -2.24
DDX4Q9NQI0 Y_RNA.120-201ENST00000363304 110 ntBASIC1.02□□□□□ -2.25
DDX4Q9NQI0 RNU6-654P-201ENST00000364373 107 ntBASIC1.02□□□□□ -2.25
DDX4Q9NQI0 RNU6-580P-201ENST00000365159 107 ntBASIC1.02□□□□□ -2.25
DDX4Q9NQI0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.02□□□□□ -2.25
DDX4Q9NQI0 HMGN1P33-201ENST00000432945 451 ntBASIC1.02□□□□□ -2.25
DDX4Q9NQI0 FABP5P4-201ENST00000437203 171 ntBASIC1.02□□□□□ -2.25
DDX4Q9NQI0 AC036111.3-201ENST00000526389 112 ntBASIC1.02□□□□□ -2.25
DDX4Q9NQI0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
DDX4Q9NQI0 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
DDX4Q9NQI0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
DDX4Q9NQI0 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 RNU6-1130P-201ENST00000365434 107 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 RNU6-804P-201ENST00000384286 107 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 RNU6-1190P-201ENST00000410811 104 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 AC090844.1-201ENST00000422019 156 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 AC067940.1-201ENST00000458411 300 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 AC023827.1-201ENST00000569247 97 ntBASIC1.01□□□□□ -2.25
DDX4Q9NQI0 Y_RNA.8-201ENST00000362353 102 ntBASIC1□□□□□ -2.25
DDX4Q9NQI0 Y_RNA.251-201ENST00000364551 99 ntBASIC1□□□□□ -2.25
DDX4Q9NQI0 Y_RNA.400-201ENST00000383963 111 ntBASIC1□□□□□ -2.25
DDX4Q9NQI0 RNU6-209P-201ENST00000384118 107 ntBASIC1□□□□□ -2.25
DDX4Q9NQI0 RNU7-62P-201ENST00000458856 62 ntBASIC1□□□□□ -2.25
DDX4Q9NQI0 MIR6841-201ENST00000637129 72 ntBASIC1□□□□□ -2.25
DDX4Q9NQI0 SNORA22.1-201ENST00000362701 134 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 Y_RNA.398-201ENST00000383952 99 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 RNU6-205P-201ENST00000390858 107 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 AL603914.1-201ENST00000401964 204 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 MIR548I1-201ENST00000408810 149 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 RNU6-994P-201ENST00000410507 111 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 AC244023.1-201ENST00000426884 112 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 MIR548X2-201ENST00000579776 100 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 AC242498.1-201ENST00000604134 111 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
DDX4Q9NQI0 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
DDX4Q9NQI0 RNU6-349P-201ENST00000362402 107 ntBASIC0.98□□□□□ -2.25
DDX4Q9NQI0 RNA5SP95-201ENST00000410319 137 ntBASIC0.98□□□□□ -2.25
DDX4Q9NQI0 RNU7-197P-201ENST00000458836 62 ntBASIC0.98□□□□□ -2.25
DDX4Q9NQI0 RNU7-45P-201ENST00000459460 63 ntBASIC0.98□□□□□ -2.25
DDX4Q9NQI0 MIR4714-201ENST00000580728 77 ntBASIC0.98□□□□□ -2.25
DDX4Q9NQI0 RNU6-690P-201ENST00000365242 106 ntBASIC0.97□□□□□ -2.25
DDX4Q9NQI0 MIR598-201ENST00000384868 97 ntBASIC0.97□□□□□ -2.25
DDX4Q9NQI0 MIR942-201ENST00000401111 86 ntBASIC0.97□□□□□ -2.25
DDX4Q9NQI0 snoU13.2-201ENST00000459201 104 ntBASIC0.97□□□□□ -2.25
DDX4Q9NQI0 Y_RNA.690-201ENST00000516603 95 ntBASIC0.97□□□□□ -2.25
DDX4Q9NQI0 RNU2-60P-201ENST00000517290 128 ntBASIC0.97□□□□□ -2.25
DDX4Q9NQI0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.97□□□□□ -2.25
DDX4Q9NQI0 AL136317.1-201ENST00000612653 226 ntBASIC0.97□□□□□ -2.25
DDX4Q9NQI0 Y_RNA.215-201ENST00000364204 112 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 RNU4-16P-201ENST00000364737 141 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 MIR7-2-201ENST00000384970 110 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 MIR613-201ENST00000385248 95 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 AL022718.1-201ENST00000412004 84 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 AC004941.2-201ENST00000427009 228 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 RNA5SP480-201ENST00000516840 109 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 AC021753.1-201ENST00000635724 168 ntBASIC0.96□□□□□ -2.26
DDX4Q9NQI0 RNY1P5-201ENST00000383890 115 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 MIR588-201ENST00000384900 83 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 MIR563-201ENST00000385080 79 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 MT-TF-201ENST00000387314 71 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 RNA5SP144-201ENST00000410846 116 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 POLR2J4-204ENST00000418424 324 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 MIR18B-201ENST00000454574 71 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 SNORA25.12-201ENST00000516202 82 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 RNU6-94P-201ENST00000607728 107 ntBASIC0.95□□□□□ -2.26
DDX4Q9NQI0 Y_RNA.170-201ENST00000363746 110 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 Y_RNA.488-201ENST00000384403 102 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 RNU6-1165P-201ENST00000410119 107 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 U7.7-201ENST00000459276 60 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 PDCD5P2-201ENST00000507570 312 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 RNU7-200P-201ENST00000516105 62 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 Y_RNA.692-201ENST00000516627 105 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 MTND5P41-201ENST00000517498 206 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 AC133485.4-201ENST00000561835 220 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms