Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 MIR624-201ENST00000385217 97 ntBASIC0.51□□□□□ -2.33
ELL3Q9HB65 MIR938-201ENST00000401216 83 ntBASIC0.51□□□□□ -2.33
ELL3Q9HB65 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.51□□□□□ -2.33
ELL3Q9HB65 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
ELL3Q9HB65 RNA5SP127-201ENST00000411051 133 ntBASIC0.51□□□□□ -2.33
ELL3Q9HB65 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.51□□□□□ -2.33
ELL3Q9HB65 RNU7-102P-201ENST00000458948 62 ntBASIC0.51□□□□□ -2.33
ELL3Q9HB65 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.51□□□□□ -2.33
ELL3Q9HB65 AC130289.1-201ENST00000577321 73 ntBASIC0.51□□□□□ -2.33
ELL3Q9HB65 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
ELL3Q9HB65 MIR411-201ENST00000362239 96 ntBASIC0.5□□□□□ -2.33
ELL3Q9HB65 Y_RNA.75-201ENST00000362927 97 ntBASIC0.5□□□□□ -2.33
ELL3Q9HB65 RNU6-1082P-201ENST00000364574 107 ntBASIC0.5□□□□□ -2.33
ELL3Q9HB65 RNU4-16P-201ENST00000364737 141 ntBASIC0.5□□□□□ -2.33
ELL3Q9HB65 RNU7-156P-201ENST00000517214 74 ntBASIC0.5□□□□□ -2.33
ELL3Q9HB65 AC021613.1-201ENST00000623880 111 ntBASIC0.5□□□□□ -2.33
ELL3Q9HB65 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
ELL3Q9HB65 Y_RNA.144-201ENST00000363521 113 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 RNY1P11-201ENST00000363759 113 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 Y_RNA.200-201ENST00000364018 102 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 RNU6-768P-201ENST00000384683 107 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 U8.15-201ENST00000390947 134 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 AL078595.1-201ENST00000404458 226 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 RNU6-1219P-201ENST00000516143 112 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 AC090897.1-201ENST00000580909 226 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 SNORD92-201ENST00000585078 85 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 AL662814.1-201ENST00000617364 121 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
ELL3Q9HB65 Y_RNA.274-201ENST00000364714 101 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 RNU1-133P-201ENST00000364867 167 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 Y_RNA.454-201ENST00000384224 113 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 RNU6-342P-201ENST00000384521 104 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 MIR5000-201ENST00000577717 103 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 AC009779.6-201ENST00000603972 165 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 MIR8066-201ENST00000617280 78 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 MIR6734-201ENST00000621166 68 ntBASIC0.48□□□□□ -2.33
ELL3Q9HB65 SNORA22.1-201ENST00000362701 134 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 Y_RNA.83-201ENST00000363005 113 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 Y_RNA.171-201ENST00000363760 102 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 MIR1257-201ENST00000408490 117 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 AC002350.1-201ENST00000490759 375 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 RNU6-1223P-201ENST00000517124 104 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 Y_RNA.757-201ENST00000578934 114 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 AL162730.1-201ENST00000605734 292 ntBASIC0.47□□□□□ -2.33
ELL3Q9HB65 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
ELL3Q9HB65 RNU6-349P-201ENST00000362402 107 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 Y_RNA.52-201ENST00000362760 96 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 Y_RNA.354-201ENST00000365448 111 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 Y_RNA.435-201ENST00000384095 112 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 RNU6-364P-201ENST00000384387 107 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 MT-TF-201ENST00000387314 71 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 SNORD100-201ENST00000408573 76 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 Y_RNA.617-201ENST00000410920 90 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 RNA5SP436-201ENST00000516020 115 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 RNA5SP236-201ENST00000516169 116 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 AC141846.1-201ENST00000568348 142 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 MIR3152-201ENST00000579801 74 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 MIR4431-201ENST00000579990 94 ntBASIC0.46□□□□□ -2.34
ELL3Q9HB65 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.46□□□□□ -2.34
ELL3Q9HB65 RNU6-508P-201ENST00000363231 103 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 Y_RNA.116-201ENST00000363292 103 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 SNORA25.7-201ENST00000364375 127 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 Y_RNA.588-201ENST00000391254 102 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 SNORD93-201ENST00000408813 74 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-447P-201ENST00000410293 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-1118P-201ENST00000410382 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-1076P-201ENST00000410397 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-355P-201ENST00000410427 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-791P-201ENST00000410467 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-705P-201ENST00000410601 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-1100P-201ENST00000410691 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-860P-201ENST00000410860 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-1217P-201ENST00000411276 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-785P-201ENST00000411324 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNA5SP220-201ENST00000516298 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 SNORA4-201ENST00000584302 138 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 U6.90-201ENST00000614007 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 AC141273.2-201ENST00000618989 130 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 U6.70-201ENST00000620287 104 ntBASIC0.45□□□□□ -2.34
ELL3Q9HB65 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
ELL3Q9HB65 Y_RNA.42-201ENST00000362660 108 ntBASIC0.44□□□□□ -2.34
ELL3Q9HB65 RNU6-379P-201ENST00000363813 104 ntBASIC0.44□□□□□ -2.34
ELL3Q9HB65 Y_RNA.470-201ENST00000384307 117 ntBASIC0.44□□□□□ -2.34
ELL3Q9HB65 SNORA18-201ENST00000384416 132 ntBASIC0.44□□□□□ -2.34
ELL3Q9HB65 Y_RNA.521-201ENST00000384560 114 ntBASIC0.44□□□□□ -2.34
ELL3Q9HB65 RNU6-679P-201ENST00000391003 106 ntBASIC0.44□□□□□ -2.34
ELL3Q9HB65 RNA5SP261-201ENST00000410536 106 ntBASIC0.44□□□□□ -2.34
ELL3Q9HB65 RNU7-70P-201ENST00000516941 66 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms