Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MIR4778-201ENST00000577635 80 ntBASIC1.6□□□□□ -2.15
EBF3Q9H4W6 MIR8070-201ENST00000616510 88 ntBASIC1.6□□□□□ -2.15
EBF3Q9H4W6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
EBF3Q9H4W6 MIR424-201ENST00000362227 98 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 Y_RNA.78-201ENST00000362970 110 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 Y_RNA.470-201ENST00000384307 117 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 Y_RNA.544-201ENST00000384650 113 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 RNU6-913P-201ENST00000390913 95 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 AL035398.1-201ENST00000430869 322 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 MTATP8P2-201ENST00000435212 202 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 PGBD4P5-201ENST00000445958 426 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 MIR548AR-201ENST00000582191 57 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 MIR6841-201ENST00000637129 72 ntBASIC1.59□□□□□ -2.15
EBF3Q9H4W6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
EBF3Q9H4W6 SNORD115-19-201ENST00000363098 82 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 SNORD115-18-201ENST00000363293 82 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 SNORD115-17-201ENST00000364612 82 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 RNU6-1113P-201ENST00000384348 107 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 MIR660-201ENST00000385235 97 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 RPL39P25-201ENST00000449384 154 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 RNU6-958P-201ENST00000516995 106 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 RNU1-92P-201ENST00000517017 135 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 Y_RNA.818-201ENST00000618813 71 ntBASIC1.58□□□□□ -2.16
EBF3Q9H4W6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
EBF3Q9H4W6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
EBF3Q9H4W6 MIR302B-201ENST00000362188 73 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 RNU6-1099P-201ENST00000363533 107 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 SNORA24-201ENST00000384096 131 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 MIR194-1-201ENST00000384892 85 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 MIR452-201ENST00000385020 85 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 MIR605-201ENST00000385078 83 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 RNU6-747P-201ENST00000390928 104 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 RNU6-241P-201ENST00000391148 104 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
EBF3Q9H4W6 RNU6-177P-201ENST00000411257 104 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 AL022718.1-201ENST00000412004 84 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 RPS3AP1-201ENST00000413190 320 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
EBF3Q9H4W6 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 Y_RNA.342-201ENST00000365352 113 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 Y_RNA.466-201ENST00000384294 113 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 MIR1302-4-201ENST00000408701 150 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 RNY4P29-201ENST00000410801 97 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 AL161935.2-201ENST00000414627 60 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 SNORD123-201ENST00000459473 70 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 RNU6-158P-201ENST00000517104 100 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 MIR548AE2-201ENST00000583456 67 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 MIR548Z-201ENST00000584743 97 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
EBF3Q9H4W6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
EBF3Q9H4W6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.55□□□□□ -2.16
EBF3Q9H4W6 SNORD115-2-201ENST00000362842 82 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 RNU6-363P-201ENST00000362895 105 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 SNORD115-20-201ENST00000365099 82 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 MIR577-201ENST00000385196 96 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 MIR136-201ENST00000385207 82 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
EBF3Q9H4W6 HMGN1P33-201ENST00000432945 451 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 JTBP1-201ENST00000441314 247 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 RNU6-844P-201ENST00000517175 102 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 AC062037.1-201ENST00000605302 128 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 MIR4791-201ENST00000607666 84 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 MALAT1.1-201ENST00000618249 95 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 MIR6717-201ENST00000622747 73 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 SNORD3E-202ENST00000627253 216 ntBASIC1.55□□□□□ -2.16
EBF3Q9H4W6 SNORA22.1-201ENST00000362701 134 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 RNY3P2-201ENST00000362918 102 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 Y_RNA.360-201ENST00000365512 102 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 RNU6-616P-201ENST00000384353 107 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 RNU6-679P-201ENST00000391003 106 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 MIR1912-201ENST00000410389 80 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 RNU4-69P-201ENST00000410677 143 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 RPS29P29-201ENST00000456396 171 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 RNU7-67P-201ENST00000459003 62 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 RNU7-113P-201ENST00000459273 62 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 DEFB131E-201ENST00000532329 154 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 AL020996.3-201ENST00000606617 222 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 AL442128.1-201ENST00000615151 90 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 AC012531.4-201ENST00000616509 177 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 AC243994.1-201ENST00000618627 109 ntBASIC1.54□□□□□ -2.16
EBF3Q9H4W6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.16
EBF3Q9H4W6 Y_RNA.93-201ENST00000363066 109 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 RNU4-67P-201ENST00000364569 141 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 SNORA25.9-201ENST00000365087 128 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms