Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
RNF41Q9H4P4 RNU6-574P-201ENST00000384265 107 ntBASIC0.5□□□□□ -2.33
RNF41Q9H4P4 MIR624-201ENST00000385217 97 ntBASIC0.5□□□□□ -2.33
RNF41Q9H4P4 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
RNF41Q9H4P4 SEPT7P4-201ENST00000437076 306 ntBASIC0.5□□□□□ -2.33
RNF41Q9H4P4 RNU4-71P-201ENST00000516258 113 ntBASIC0.5□□□□□ -2.33
RNF41Q9H4P4 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
RNF41Q9H4P4 U6.106-201ENST00000636360 105 ntBASIC0.5□□□□□ -2.33
RNF41Q9H4P4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
RNF41Q9H4P4 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.182-201ENST00000363880 111 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.307-201ENST00000365022 117 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 RNU6-643P-201ENST00000384018 107 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.452-201ENST00000384202 108 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.454-201ENST00000384224 113 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 MIR938-201ENST00000401216 83 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 MIR3612-201ENST00000579753 87 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 SNORD92-201ENST00000585078 85 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 AL596211.1-201ENST00000569873 2277 ntBASIC0.49□□□□□ -2.33
RNF41Q9H4P4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.75-201ENST00000362927 97 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 RNU6-702P-201ENST00000364982 107 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.435-201ENST00000384095 112 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 MT-TF-201ENST00000387314 71 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 SNORD100-201ENST00000408573 76 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 RNA5SP261-201ENST00000410536 106 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 RNA5SP127-201ENST00000411051 133 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
RNF41Q9H4P4 AC090897.1-201ENST00000580909 226 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 AL353621.2-201ENST00000605340 133 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 AC021613.1-201ENST00000623880 111 ntBASIC0.48□□□□□ -2.33
RNF41Q9H4P4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
RNF41Q9H4P4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
RNF41Q9H4P4 SNORA20.1-201ENST00000364790 130 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 RNU6-196P-201ENST00000384315 107 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 MIR598-201ENST00000384868 97 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 AC096949.1-201ENST00000412047 152 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 RNU7-102P-201ENST00000458948 62 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 RNU6-1149P-201ENST00000516810 97 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 RNU7-156P-201ENST00000517214 74 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 MIR3152-201ENST00000579801 74 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 MIR3149-201ENST00000584629 83 ntBASIC0.47□□□□□ -2.33
RNF41Q9H4P4 RNU6-47P-201ENST00000383866 107 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 RNU6-1336P-201ENST00000383886 109 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 RNU6-463P-201ENST00000384340 107 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 RNU4-70P-201ENST00000384579 139 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.46□□□□□ -2.34
RNF41Q9H4P4 RNU6-1258P-201ENST00000516911 111 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 AL662814.1-201ENST00000617364 121 ntBASIC0.46□□□□□ -2.34
RNF41Q9H4P4 SNORA36.2-201ENST00000384004 127 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 MIR140-201ENST00000385282 100 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 MIR1257-201ENST00000408490 117 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-447P-201ENST00000410293 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-355P-201ENST00000410427 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-791P-201ENST00000410467 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-705P-201ENST00000410601 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-1100P-201ENST00000410691 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-860P-201ENST00000410860 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-1217P-201ENST00000411276 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 RNU6-785P-201ENST00000411324 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 AC002350.1-201ENST00000490759 375 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.45□□□□□ -2.34
RNF41Q9H4P4 AC009779.6-201ENST00000603972 165 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 U6.90-201ENST00000614007 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 MIR8066-201ENST00000617280 78 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 U6.70-201ENST00000620287 104 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
RNF41Q9H4P4 MTND5P32-201ENST00000560711 1802 ntBASIC0.45□□□□□ -2.34
RNF41Q9H4P4 AL589743.1-201ENST00000551932 2712 ntBASIC0.44□□□□□ -2.34
RNF41Q9H4P4 MIR411-201ENST00000362239 96 ntBASIC0.44□□□□□ -2.34
RNF41Q9H4P4 SNORA22.1-201ENST00000362701 134 ntBASIC0.44□□□□□ -2.34
RNF41Q9H4P4 U8.15-201ENST00000390947 134 ntBASIC0.44□□□□□ -2.34
RNF41Q9H4P4 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
RNF41Q9H4P4 MIR4431-201ENST00000579990 94 ntBASIC0.44□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.43□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.200-201ENST00000364018 102 ntBASIC0.43□□□□□ -2.34
RNF41Q9H4P4 SNORA25.7-201ENST00000364375 127 ntBASIC0.43□□□□□ -2.34
RNF41Q9H4P4 RNU6-364P-201ENST00000384387 107 ntBASIC0.43□□□□□ -2.34
RNF41Q9H4P4 RNA5SP236-201ENST00000516169 116 ntBASIC0.43□□□□□ -2.34
RNF41Q9H4P4 AC141846.1-201ENST00000568348 142 ntBASIC0.43□□□□□ -2.34
RNF41Q9H4P4 RNU6-349P-201ENST00000362402 107 ntBASIC0.42□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.83-201ENST00000363005 113 ntBASIC0.42□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.42□□□□□ -2.34
RNF41Q9H4P4 RNU4-45P-201ENST00000365469 141 ntBASIC0.42□□□□□ -2.34
RNF41Q9H4P4 RNU6-768P-201ENST00000384683 107 ntBASIC0.42□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms