Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 MIR204-201ENST00000385200 110 ntBASIC-1.32□□□□□ -2.62
CHMP4BQ9H444 SNORD57-201ENST00000448188 72 ntBASIC-1.32□□□□□ -2.62
CHMP4BQ9H444 RNU6-764P-201ENST00000516396 105 ntBASIC-1.32□□□□□ -2.62
CHMP4BQ9H444 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.33□□□□□ -2.62
CHMP4BQ9H444 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.33□□□□□ -2.62
CHMP4BQ9H444 RNU4-14P-201ENST00000410858 122 ntBASIC-1.33□□□□□ -2.62
CHMP4BQ9H444 snoU13.19-201ENST00000459148 104 ntBASIC-1.33□□□□□ -2.62
CHMP4BQ9H444 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 RNY4P3-201ENST00000365254 95 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 RNU6-47P-201ENST00000383866 107 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 AC245505.1-201ENST00000556398 224 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 MIR5692C2-201ENST00000577959 77 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 MIR4473-201ENST00000583731 91 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 AC093726.3-201ENST00000637588 150 ntBASIC-1.34□□□□□ -2.62
CHMP4BQ9H444 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.35□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.35□□□□□ -2.63
CHMP4BQ9H444 RNY1P2-201ENST00000364820 117 ntBASIC-1.35□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.35□□□□□ -2.63
CHMP4BQ9H444 RNU4-70P-201ENST00000384579 139 ntBASIC-1.35□□□□□ -2.63
CHMP4BQ9H444 RNU6-274P-201ENST00000459566 107 ntBASIC-1.35□□□□□ -2.63
CHMP4BQ9H444 RNU6-86P-201ENST00000606534 107 ntBASIC-1.35□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 SNORD115-2-201ENST00000362842 82 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 RNU6-455P-201ENST00000384681 107 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 MIR599-201ENST00000385069 95 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 RNU6-721P-201ENST00000410155 105 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 RNU6-370P-201ENST00000411008 104 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 AC099799.1-201ENST00000439809 192 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 MRPS35P2-201ENST00000508242 191 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 RN7SKP19-201ENST00000516016 252 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 MIR5197-201ENST00000583721 112 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 SNORD113-5-201ENST00000607261 78 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 AC048344.4-201ENST00000619744 527 ntBASIC-1.36□□□□□ -2.63
CHMP4BQ9H444 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 RNU4-16P-201ENST00000364737 141 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 SEPT14P8-201ENST00000508026 178 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 MIR3115-201ENST00000577915 68 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 MIR548AX-201ENST00000580117 73 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 AL121655.1-201ENST00000605811 308 ntBASIC-1.37□□□□□ -2.63
CHMP4BQ9H444 RNU6-449P-201ENST00000383914 107 ntBASIC-1.38□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.38□□□□□ -2.63
CHMP4BQ9H444 MIR181B2-201ENST00000385004 89 ntBASIC-1.38□□□□□ -2.63
CHMP4BQ9H444 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.38□□□□□ -2.63
CHMP4BQ9H444 RNU7-35P-201ENST00000517174 62 ntBASIC-1.38□□□□□ -2.63
CHMP4BQ9H444 C8orf59P2-201ENST00000603441 271 ntBASIC-1.38□□□□□ -2.63
CHMP4BQ9H444 RNU7-10P-201ENST00000607194 63 ntBASIC-1.38□□□□□ -2.63
CHMP4BQ9H444 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.38□□□□□ -2.63
CHMP4BQ9H444 RNU4-36P-201ENST00000364294 144 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 MTND1P34-201ENST00000438556 671 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 MTND4P17-201ENST00000470444 350 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 SNORD38.3-201ENST00000516599 73 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 uc_338.10-201ENST00000621872 182 ntBASIC-1.39□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 RNU6-24P-201ENST00000384440 107 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 MIR587-201ENST00000384845 96 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 MIR3920-201ENST00000581751 86 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 MIR5690-201ENST00000583739 73 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 AC098479.1-201ENST00000609225 154 ntBASIC-1.4□□□□□ -2.63
CHMP4BQ9H444 RNU1-141P-201ENST00000364623 158 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 RNU6-484P-201ENST00000384016 107 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 MIR526A2-201ENST00000390198 65 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 RNU7-74P-201ENST00000459104 62 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 AC021146.6-201ENST00000514659 117 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 SNORA27.4-201ENST00000516650 95 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 MIR4272-201ENST00000635924 64 ntBASIC-1.41□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 RNU4-10P-201ENST00000364383 140 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 AC097635.1-201ENST00000450678 155 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 RNU6-893P-201ENST00000458841 100 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 TRAJ51-201ENST00000504127 63 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 RNU7-70P-201ENST00000516941 66 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 AC040926.1-201ENST00000530195 238 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 MIR3129-201ENST00000581095 76 ntBASIC-1.42□□□□□ -2.64
CHMP4BQ9H444 AC007485.1-201ENST00000616755 206 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms