Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC244023.1-201ENST00000426884 112 ntBASIC1.66□□□□□ -2.14
CCDC113Q9H0I3 AC023790.1-201ENST00000482174 347 ntBASIC1.66□□□□□ -2.14
CCDC113Q9H0I3 RNU6-659P-201ENST00000516454 104 ntBASIC1.66□□□□□ -2.14
CCDC113Q9H0I3 AC242498.1-201ENST00000604134 111 ntBASIC1.66□□□□□ -2.14
CCDC113Q9H0I3 AL365222.1-201ENST00000614661 98 ntBASIC1.66□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 RNU6-654P-201ENST00000364373 107 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 SNORA2B-201ENST00000384583 137 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 SNORA75.2-201ENST00000391138 150 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 SNORA75.3-201ENST00000391231 150 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 RNU6-613P-201ENST00000410412 108 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 RNU6-313P-201ENST00000516317 112 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 RNU6-1258P-201ENST00000516911 111 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 AL359881.1-201ENST00000602916 267 ntBASIC1.65□□□□□ -2.15
CCDC113Q9H0I3 RNA5SP327-201ENST00000362494 101 ntBASIC1.64□□□□□ -2.15
CCDC113Q9H0I3 Y_RNA.261-201ENST00000364631 102 ntBASIC1.64□□□□□ -2.15
CCDC113Q9H0I3 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
CCDC113Q9H0I3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.64□□□□□ -2.15
CCDC113Q9H0I3 BTF3P4-201ENST00000418852 495 ntBASIC1.64□□□□□ -2.15
CCDC113Q9H0I3 RNU7-90P-201ENST00000459216 62 ntBASIC1.64□□□□□ -2.15
CCDC113Q9H0I3 SNORD113-1-201ENST00000365321 69 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 Y_RNA.525-201ENST00000384570 113 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 MIR588-201ENST00000384900 83 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 RNA5SP95-201ENST00000410319 137 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 AP1B1P2-201ENST00000416196 106 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 RNU7-62P-201ENST00000458856 62 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 RNU7-95P-201ENST00000459222 64 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 COX6CP6-201ENST00000490840 228 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 SNORD79.1-201ENST00000516069 84 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 RNU6-479P-201ENST00000516348 105 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 MTND5P18-201ENST00000445624 1801 ntBASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC113Q9H0I3 SNORD115-2-201ENST00000362842 82 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 Y_RNA.198-201ENST00000364013 98 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 SNORD115-20-201ENST00000365099 82 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 SNORA25-201ENST00000384384 134 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 SNORA18-201ENST00000384416 132 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 RNU6-1081P-201ENST00000384537 107 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 RNU6-1168P-201ENST00000390831 104 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 snoU13.2-201ENST00000459201 104 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 RNU7-21P-201ENST00000459430 62 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 Y_RNA.712-201ENST00000517011 92 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 AC008163.1-202ENST00000636004 2889 ntBASIC1.62□□□□□ -2.15
CCDC113Q9H0I3 MIR378A-201ENST00000362177 66 ntBASIC1.61□□□□□ -2.15
CCDC113Q9H0I3 SNORD113.3-201ENST00000364630 78 ntBASIC1.61□□□□□ -2.15
CCDC113Q9H0I3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.61□□□□□ -2.15
CCDC113Q9H0I3 MIR1304-201ENST00000408243 91 ntBASIC1.61□□□□□ -2.15
CCDC113Q9H0I3 AL354695.1-201ENST00000427935 228 ntBASIC1.61□□□□□ -2.15
CCDC113Q9H0I3 RPS29P23-201ENST00000458635 123 ntBASIC1.61□□□□□ -2.15
CCDC113Q9H0I3 U6.95-201ENST00000636931 70 ntBASIC1.61□□□□□ -2.15
CCDC113Q9H0I3 MIR377-201ENST00000362145 69 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 SNORA25.8-201ENST00000364831 128 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 SNORD12-201ENST00000391002 90 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 RNU4-69P-201ENST00000410677 143 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 RNU2-51P-201ENST00000410708 197 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 RPL39P25-201ENST00000449384 154 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 AC022523.2-201ENST00000561045 150 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 AC023827.1-201ENST00000569247 97 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 MIR548AI-201ENST00000579940 88 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 AL512598.1-201ENST00000610158 273 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 MIR3914-2-201ENST00000637339 95 ntBASIC1.6□□□□□ -2.15
CCDC113Q9H0I3 SNORA32-201ENST00000384072 121 ntBASIC1.59□□□□□ -2.15
CCDC113Q9H0I3 RNU6-1104P-201ENST00000384723 104 ntBASIC1.59□□□□□ -2.15
CCDC113Q9H0I3 SNORD77B-201ENST00000391112 67 ntBASIC1.59□□□□□ -2.15
CCDC113Q9H0I3 SNORD111-201ENST00000408139 94 ntBASIC1.59□□□□□ -2.15
CCDC113Q9H0I3 RPS23P4-201ENST00000487908 423 ntBASIC1.59□□□□□ -2.15
CCDC113Q9H0I3 RNU7-6P-201ENST00000516845 62 ntBASIC1.59□□□□□ -2.15
CCDC113Q9H0I3 AC019288.1-201ENST00000557918 224 ntBASIC1.59□□□□□ -2.15
CCDC113Q9H0I3 MIR3163-201ENST00000581592 73 ntBASIC1.59□□□□□ -2.15
CCDC113Q9H0I3 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
CCDC113Q9H0I3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.58□□□□□ -2.16
CCDC113Q9H0I3 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
CCDC113Q9H0I3 RNU6-342P-201ENST00000384521 104 ntBASIC1.58□□□□□ -2.16
CCDC113Q9H0I3 MIRLET7F2-201ENST00000385277 83 ntBASIC1.58□□□□□ -2.16
CCDC113Q9H0I3 MIR548AE2-201ENST00000583456 67 ntBASIC1.58□□□□□ -2.16
CCDC113Q9H0I3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
CCDC113Q9H0I3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 SNORA22C-201ENST00000384614 134 ntBASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 MIR548A3-201ENST00000385297 97 ntBASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 AC063976.4-201ENST00000421971 163 ntBASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 AC036111.3-201ENST00000526389 112 ntBASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 MIR4498-201ENST00000577599 66 ntBASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 snoU13.31-201ENST00000607291 104 ntBASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 MIR6740-201ENST00000618268 113 ntBASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC113Q9H0I3 RNY4P6-201ENST00000363667 96 ntBASIC1.56□□□□□ -2.16
CCDC113Q9H0I3 RNU6-580P-201ENST00000365159 107 ntBASIC1.56□□□□□ -2.16
CCDC113Q9H0I3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.56□□□□□ -2.16
CCDC113Q9H0I3 Y_RNA.649-201ENST00000459077 103 ntBASIC1.56□□□□□ -2.16
CCDC113Q9H0I3 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms