Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 U8.16-201ENST00000391279 133 ntBASIC1.9□□□□□ -2.11
SALL3Q9BXA9 RNU7-61P-201ENST00000515897 61 ntBASIC1.9□□□□□ -2.11
SALL3Q9BXA9 RNVU1-2-201ENST00000516326 135 ntBASIC1.9□□□□□ -2.11
SALL3Q9BXA9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.9□□□□□ -2.11
SALL3Q9BXA9 AC068339.1-201ENST00000526965 141 ntBASIC1.9□□□□□ -2.11
SALL3Q9BXA9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SALL3Q9BXA9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.89□□□□□ -2.11
SALL3Q9BXA9 Y_RNA.78-201ENST00000362970 110 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 RNU6-690P-201ENST00000365242 106 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 Y_RNA.565-201ENST00000384719 101 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 MIR759-201ENST00000390224 91 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 SNORA17.3-201ENST00000391159 129 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 HSPE1P9-201ENST00000440046 311 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.89□□□□□ -2.11
SALL3Q9BXA9 AC019288.1-201ENST00000557918 224 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 SNORA4-201ENST00000584302 138 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 BX248123.2-201ENST00000606318 124 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 AC012531.4-201ENST00000616509 177 ntBASIC1.89□□□□□ -2.11
SALL3Q9BXA9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SALL3Q9BXA9 SNORA1.2-201ENST00000365189 134 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 SNORA27-201ENST00000384323 126 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 RNU6-644P-201ENST00000391155 98 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 RNA5SP501-201ENST00000410990 112 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 AP1B1P2-201ENST00000416196 106 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 AL353813.1-201ENST00000440700 253 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 RNU7-96P-201ENST00000459535 64 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 RNU7-12P-201ENST00000516030 62 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
SALL3Q9BXA9 AL513423.1-201ENST00000621695 132 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 AC091932.4-201ENST00000623386 200 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 AC006160.2-201ENST00000637708 154 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 AC091304.10-201ENST00000641554 121 ntBASIC1.88□□□□□ -2.11
SALL3Q9BXA9 Y_RNA.93-201ENST00000363066 109 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 Y_RNA.213-201ENST00000364178 111 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 Y_RNA.298-201ENST00000364960 107 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 SNORD115-35-201ENST00000365122 82 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 MIR452-201ENST00000385020 85 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SALL3Q9BXA9 U8.17-201ENST00000391292 132 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.87□□□□□ -2.11
SALL3Q9BXA9 RPS29P29-201ENST00000456396 171 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 RNA5SP220-201ENST00000516298 104 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 RNU6-795P-201ENST00000516323 103 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 RNA5SP480-201ENST00000516840 109 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 AC022523.2-201ENST00000561045 150 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 AL078603.1-201ENST00000603824 313 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 AL645939.4-201ENST00000604495 135 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 U7.3-201ENST00000616123 62 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 Y_RNA.788-201ENST00000622394 112 ntBASIC1.87□□□□□ -2.11
SALL3Q9BXA9 SNORA4.2-201ENST00000365313 147 ntBASIC1.86□□□□□ -2.11
SALL3Q9BXA9 RNU2-7P-201ENST00000410794 178 ntBASIC1.86□□□□□ -2.11
SALL3Q9BXA9 AL035398.1-201ENST00000430869 322 ntBASIC1.86□□□□□ -2.11
SALL3Q9BXA9 RNU6-998P-201ENST00000515894 101 ntBASIC1.86□□□□□ -2.11
SALL3Q9BXA9 MIR4305-201ENST00000583252 102 ntBASIC1.86□□□□□ -2.11
SALL3Q9BXA9 AC021443.1-201ENST00000604478 211 ntBASIC1.86□□□□□ -2.11
SALL3Q9BXA9 MIR6504-201ENST00000613520 61 ntBASIC1.86□□□□□ -2.11
SALL3Q9BXA9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.86□□□□□ -2.11
SALL3Q9BXA9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 RNU6-652P-201ENST00000365488 107 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 MIR136-201ENST00000385207 82 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 AL451046.2-201ENST00000403074 277 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 MIR1265-201ENST00000408444 86 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 MIR1267-201ENST00000408723 78 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.85□□□□□ -2.11
SALL3Q9BXA9 RNY4P20-201ENST00000516678 93 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 RNA5SP437-201ENST00000517249 129 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 MIR4777-201ENST00000583710 86 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 IGLL4P-201ENST00000614590 133 ntBASIC1.85□□□□□ -2.11
SALL3Q9BXA9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SALL3Q9BXA9 Y_RNA.49-201ENST00000362714 112 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 RNU6-1113P-201ENST00000384348 107 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 RNU6-360P-201ENST00000390944 104 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.84□□□□□ -2.12
SALL3Q9BXA9 RNU7-164P-201ENST00000459221 62 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 MIR4709-201ENST00000577272 72 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 MIR4303-201ENST00000581299 66 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 AL512598.1-201ENST00000610158 273 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 AC021506.2-201ENST00000612354 169 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 AL589743.1-201ENST00000551932 2712 ntBASIC1.84□□□□□ -2.12
SALL3Q9BXA9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.83□□□□□ -2.12
SALL3Q9BXA9 RNY3P2-201ENST00000362918 102 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 RNU6-1099P-201ENST00000363533 107 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 RNU6-242P-201ENST00000384359 107 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.540-201ENST00000384638 111 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 MIR660-201ENST00000385235 97 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 Y_RNA.620-201ENST00000411009 88 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 SUMO2P16-201ENST00000519475 264 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 MIR6734-201ENST00000621166 68 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.83□□□□□ -2.12
SALL3Q9BXA9 MIR4662A-201ENST00000637499 67 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms