Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SNORD115-10-201ENST00000365073 81 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-43-201ENST00000365503 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-36-201ENST00000365629 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 RNU6-49P-201ENST00000384256 107 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 Y_RNA.544-201ENST00000384650 113 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 HSPE1P24-201ENST00000450782 238 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 RNU7-181P-201ENST00000517234 74 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 AC090821.2-201ENST00000523552 176 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 MIR4422-201ENST00000581938 83 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-40-201ENST00000606510 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD73B-201ENST00000364394 72 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 RNU6-294P-201ENST00000364999 102 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 MIR1302-4-201ENST00000408701 150 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 RNA5SP144-201ENST00000410846 116 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 AL035398.1-201ENST00000430869 322 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 RNU7-96P-201ENST00000459535 64 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 RNU6-970P-201ENST00000516312 107 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 RNU7-6P-201ENST00000516845 62 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 AL162726.3-218ENST00000636401 95 ntBASIC1.85□□□□□ -2.11
LRFN3Q9BTN0 MIR96-201ENST00000362288 78 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 MIR488-201ENST00000365739 83 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 RNU6-904P-201ENST00000516206 101 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 AC141557.1-201ENST00000540982 400 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 AC021613.1-201ENST00000623880 111 ntBASIC1.84□□□□□ -2.11
LRFN3Q9BTN0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
LRFN3Q9BTN0 MIR302B-201ENST00000362188 73 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 MIR136-201ENST00000385207 82 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 RNU6-816P-201ENST00000390914 107 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 RNU6-1268P-201ENST00000391214 107 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 RNU6-1239P-201ENST00000391310 107 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 AL512326.2-201ENST00000426359 151 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 AL645939.4-201ENST00000604495 135 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 AL157834.3-201ENST00000615543 103 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.818-201ENST00000618813 71 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 AC087741.2-201ENST00000619415 172 ntBASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
LRFN3Q9BTN0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 MTATP8P2-201ENST00000435212 202 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 RPL39P25-201ENST00000449384 154 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 AC093850.1-201ENST00000454121 251 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 RNU2-11P-201ENST00000459191 187 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 RNU7-45P-201ENST00000459460 63 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 AC104435.1-201ENST00000483483 166 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 AC004812.1-201ENST00000540773 146 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 AL513534.2-201ENST00000603836 250 ntBASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
LRFN3Q9BTN0 AP000648.3-201ENST00000623539 4507 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 RNU6-53P-201ENST00000365367 106 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 MIR516B2-201ENST00000385190 85 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 MIR653-201ENST00000385279 96 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 AL451046.2-201ENST00000403074 277 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 MIR1912-201ENST00000410389 80 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 AL022718.1-201ENST00000412004 84 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 RPS23P4-201ENST00000487908 423 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 RNU6-158P-201ENST00000517104 100 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 AP000553.5-201ENST00000641933 54 ntBASIC1.81□□□□□ -2.12
LRFN3Q9BTN0 RNU1-42P-201ENST00000364033 160 ntBASIC1.8□□□□□ -2.12
LRFN3Q9BTN0 SNORD1A-201ENST00000364968 72 ntBASIC1.8□□□□□ -2.12
LRFN3Q9BTN0 RNY1P7-201ENST00000384743 110 ntBASIC1.8□□□□□ -2.12
LRFN3Q9BTN0 AC107297.1-201ENST00000459991 176 ntBASIC1.8□□□□□ -2.12
LRFN3Q9BTN0 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
LRFN3Q9BTN0 AC113410.1-201ENST00000505029 247 ntBASIC1.8□□□□□ -2.12
LRFN3Q9BTN0 MIR4448-201ENST00000584360 86 ntBASIC1.8□□□□□ -2.12
LRFN3Q9BTN0 MIR302D-201ENST00000362275 68 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 SNORA1.2-201ENST00000365189 134 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.370-201ENST00000365589 108 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.558-201ENST00000384685 113 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 RNU6-762P-201ENST00000517107 102 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 DEFB131E-201ENST00000532329 154 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 AL357312.1-201ENST00000603879 298 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.773-201ENST00000607168 90 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 MIR2052-201ENST00000636055 55 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 MIR1255B1-201ENST00000636325 63 ntBASIC1.79□□□□□ -2.12
LRFN3Q9BTN0 SNORD115-19-201ENST00000363098 82 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 SNORD115-18-201ENST00000363293 82 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 RNU6-1099P-201ENST00000363533 107 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms