Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RNU11-2P-201ENST00000516898 142 ntBASIC1.01□□□□□ -2.25
RTP3Q9BQQ7 MIR6516-201ENST00000630554 81 ntBASIC1.01□□□□□ -2.25
RTP3Q9BQQ7 AC008163.1-202ENST00000636004 2889 ntBASIC1.01□□□□□ -2.25
RTP3Q9BQQ7 RNU6-396P-201ENST00000365369 105 ntBASIC1□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.584-201ENST00000391090 114 ntBASIC1□□□□□ -2.25
RTP3Q9BQQ7 RNU6-1190P-201ENST00000410811 104 ntBASIC1□□□□□ -2.25
RTP3Q9BQQ7 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
RTP3Q9BQQ7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1□□□□□ -2.25
RTP3Q9BQQ7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1□□□□□ -2.25
RTP3Q9BQQ7 RNU6-654P-201ENST00000364373 107 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.251-201ENST00000364551 99 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 RNU7-90P-201ENST00000459216 62 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 RNU6-255P-201ENST00000516957 105 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 SNORA1.1-201ENST00000364671 133 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.400-201ENST00000383963 111 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 RNU6-125P-201ENST00000384505 107 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 RNA5SP236-201ENST00000516169 116 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 MIR2115-201ENST00000516657 100 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 RNU2-60P-201ENST00000517290 128 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 MIR6717-201ENST00000622747 73 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 Z97988.1-201ENST00000637697 135 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.215-201ENST00000364204 112 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORD18B-201ENST00000365659 72 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORD38B-201ENST00000384690 67 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORA26.6-201ENST00000391256 115 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 MIR513C-201ENST00000401352 84 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 RNA5SP95-201ENST00000410319 137 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 AC244023.1-201ENST00000426884 112 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORA25.12-201ENST00000516202 82 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.686-201ENST00000516548 134 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 RNU6-1212P-201ENST00000517023 104 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 AC242498.1-201ENST00000604134 111 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORD38B-202ENST00000625943 69 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 RNU6-508P-201ENST00000363231 103 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-1319P-201ENST00000390855 104 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-747P-201ENST00000390928 104 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-241P-201ENST00000391148 104 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-460P-201ENST00000391158 108 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-613P-201ENST00000410412 108 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-177P-201ENST00000411257 104 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU7-197P-201ENST00000458836 62 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU7-200P-201ENST00000516105 62 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 AC036111.3-201ENST00000526389 112 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 AC023827.1-201ENST00000569247 97 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR548X2-201ENST00000579776 100 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR3152-201ENST00000579801 74 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR6513-201ENST00000621188 64 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR924-201ENST00000638017 53 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.120-201ENST00000363304 110 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU6-309P-201ENST00000364573 106 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU4-16P-201ENST00000364737 141 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU6-205P-201ENST00000390858 107 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNA5SP261-201ENST00000410536 106 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU6-602P-201ENST00000411155 105 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RPS3AP1-201ENST00000413190 320 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 MTATP6P21-201ENST00000440681 189 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 AC021613.1-201ENST00000623880 111 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU6-349P-201ENST00000362402 107 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 RNY1P6-201ENST00000384193 109 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 SNORA20-201ENST00000384662 132 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 AC004941.2-201ENST00000427009 228 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 RNA5SP272-201ENST00000516095 111 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 RNU6-346P-201ENST00000516288 111 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.690-201ENST00000516603 95 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 AP000753.3-201ENST00000604083 169 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 FAM71BP1-201ENST00000604431 523 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 AC106800.4-201ENST00000614905 153 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 AC010487.4-201ENST00000637027 61 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 SNORD114-23-201ENST00000363536 72 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 SNORD113.3-201ENST00000364630 78 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.488-201ENST00000384403 102 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 SNORA2B-201ENST00000384583 137 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 MIR569-201ENST00000385228 96 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 SNORD12C-201ENST00000386307 89 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 MT-TN-201ENST00000387400 73 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 AL603914.1-201ENST00000401964 204 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 RNU5E-3P-201ENST00000515913 68 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms