Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SNORD115-2-201ENST00000362842 82 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 SNORD115-20-201ENST00000365099 82 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 RNA5SP190-201ENST00000365222 118 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 Y_RNA.430-201ENST00000384081 110 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 RNU6-616P-201ENST00000384353 107 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 Y_RNA.507-201ENST00000384500 99 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 SNORD77B-201ENST00000391112 67 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 MIR1912-201ENST00000410389 80 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 SNORA7.5-201ENST00000410672 110 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 AL161935.2-201ENST00000414627 60 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 AC245047.7-201ENST00000440265 293 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 MIR4713-201ENST00000582691 75 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 AP001318.4-201ENST00000616637 121 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
TIMP4Q99727 RNU6-342P-201ENST00000384521 104 ntBASIC1.57□□□□□ -2.16
TIMP4Q99727 AC090844.1-201ENST00000422019 156 ntBASIC1.57□□□□□ -2.16
TIMP4Q99727 MIR1270-201ENST00000459320 83 ntBASIC1.57□□□□□ -2.16
TIMP4Q99727 RNU6-947P-201ENST00000516264 106 ntBASIC1.57□□□□□ -2.16
TIMP4Q99727 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
TIMP4Q99727 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
TIMP4Q99727 SNORD115-19-201ENST00000363098 82 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 SNORD115-18-201ENST00000363293 82 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 RNU4-67P-201ENST00000364569 141 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 SNORD115-17-201ENST00000364612 82 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 Y_RNA.348-201ENST00000365403 103 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 RNU6-409P-201ENST00000384114 104 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 RNU6-1237P-201ENST00000384777 107 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 MIR605-201ENST00000385078 83 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 Y_RNA.694-201ENST00000516677 117 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 SNORA77B-201ENST00000578179 125 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 MIR5582-201ENST00000579697 68 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 MIR8063-201ENST00000621930 81 ntBASIC1.56□□□□□ -2.16
TIMP4Q99727 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
TIMP4Q99727 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
TIMP4Q99727 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TIMP4Q99727 RNU6-363P-201ENST00000362895 105 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 SNORA18-201ENST00000384416 132 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 RNU6-905P-201ENST00000384434 107 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 Y_RNA.544-201ENST00000384650 113 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 SNORD41-201ENST00000386967 70 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 RNU6-733P-201ENST00000410759 104 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 RNU6-602P-201ENST00000411155 105 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 AL603825.1-201ENST00000438481 80 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 SNORD111.1-201ENST00000516421 86 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 Z97988.1-201ENST00000637697 135 ntBASIC1.55□□□□□ -2.16
TIMP4Q99727 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TIMP4Q99727 Y_RNA.354-201ENST00000365448 111 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 AC009474.2-201ENST00000451383 136 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 RNA5SP445-201ENST00000515889 115 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 RNA5SP458-201ENST00000516188 119 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 SNORA40.13-201ENST00000516379 120 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 DEFB131E-201ENST00000532329 154 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 AC015688.6-201ENST00000577737 104 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 MIR3192-201ENST00000584920 77 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 AC006254.2-201ENST00000603259 279 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 MIR8065-201ENST00000620577 100 ntBASIC1.54□□□□□ -2.16
TIMP4Q99727 RNY3P2-201ENST00000362918 102 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 Y_RNA.140-201ENST00000363474 103 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 RNU6-640P-201ENST00000363693 105 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 RNU4-36P-201ENST00000364294 144 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 SNORD38B-201ENST00000384690 67 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.53□□□□□ -2.16
TIMP4Q99727 RNU6-904P-201ENST00000516206 101 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 RNU6-970P-201ENST00000516312 107 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 RNU6-521P-201ENST00000516663 105 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 AP000942.3-201ENST00000603702 160 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 FAM71BP1-201ENST00000604431 523 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 SNORD38B-202ENST00000625943 69 ntBASIC1.53□□□□□ -2.16
TIMP4Q99727 SNORA25.3-201ENST00000363205 127 ntBASIC1.52□□□□□ -2.17
TIMP4Q99727 RNU6-1099P-201ENST00000363533 107 ntBASIC1.52□□□□□ -2.17
TIMP4Q99727 Y_RNA.360-201ENST00000365512 102 ntBASIC1.52□□□□□ -2.17
TIMP4Q99727 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
TIMP4Q99727 RNU6-1086P-201ENST00000410930 100 ntBASIC1.52□□□□□ -2.17
TIMP4Q99727 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
TIMP4Q99727 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.52□□□□□ -2.17
TIMP4Q99727 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.52□□□□□ -2.17
TIMP4Q99727 AL096861.1-201ENST00000610899 123 ntBASIC1.52□□□□□ -2.17
TIMP4Q99727 MIR4679-1-201ENST00000637619 75 ntBASIC1.52□□□□□ -2.17
TIMP4Q99727 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 Y_RNA.78-201ENST00000362970 110 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 RNU6-1131P-201ENST00000364955 107 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 MIR577-201ENST00000385196 96 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 RNU6-679P-201ENST00000391003 106 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 snoU13.9-201ENST00000458927 103 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 AC019176.1-201ENST00000518519 225 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 GHRLOS.1-201ENST00000610995 70 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 AL512310.12-203ENST00000640543 90 ntBASIC1.51□□□□□ -2.17
TIMP4Q99727 SNORA67.5-201ENST00000391036 107 ntBASIC1.5□□□□□ -2.17
TIMP4Q99727 AC108667.1-201ENST00000428618 249 ntBASIC1.5□□□□□ -2.17
TIMP4Q99727 AL353813.1-201ENST00000440700 253 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms