Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNU6-785P-201ENST00000411324 104 ntBASIC0.48□□□□□ -2.33
RAB40CQ96S21 RNU7-102P-201ENST00000458948 62 ntBASIC0.48□□□□□ -2.33
RAB40CQ96S21 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RAB40CQ96S21 MIR4308-201ENST00000580634 81 ntBASIC0.48□□□□□ -2.33
RAB40CQ96S21 MIR3128-201ENST00000581957 66 ntBASIC0.48□□□□□ -2.33
RAB40CQ96S21 U6.90-201ENST00000614007 104 ntBASIC0.48□□□□□ -2.33
RAB40CQ96S21 U6.70-201ENST00000620287 104 ntBASIC0.48□□□□□ -2.33
RAB40CQ96S21 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.48□□□□□ -2.33
RAB40CQ96S21 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RAB40CQ96S21 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
RAB40CQ96S21 Y_RNA.430-201ENST00000384081 110 ntBASIC0.47□□□□□ -2.33
RAB40CQ96S21 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.47□□□□□ -2.33
RAB40CQ96S21 RNU4-71P-201ENST00000516258 113 ntBASIC0.47□□□□□ -2.33
RAB40CQ96S21 RNU7-156P-201ENST00000517214 74 ntBASIC0.47□□□□□ -2.33
RAB40CQ96S21 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
RAB40CQ96S21 RNY1-201ENST00000364228 113 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 MIR624-201ENST00000385217 97 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 MIR613-201ENST00000385248 95 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 RPL39P25-201ENST00000449384 154 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 AC004812.1-201ENST00000540773 146 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 AC090897.1-201ENST00000580909 226 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 SNORD92-201ENST00000585078 85 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 MIR4719-201ENST00000585233 84 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 AC022709.1-201ENST00000615967 87 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 AL662814.1-201ENST00000617364 121 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 U4.1-201ENST00000620349 87 ntBASIC0.46□□□□□ -2.34
RAB40CQ96S21 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
RAB40CQ96S21 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RAB40CQ96S21 Y_RNA.60-201ENST00000362831 98 ntBASIC0.45□□□□□ -2.34
RAB40CQ96S21 RNU6-275P-201ENST00000364910 107 ntBASIC0.45□□□□□ -2.34
RAB40CQ96S21 RNU6-597P-201ENST00000365620 102 ntBASIC0.45□□□□□ -2.34
RAB40CQ96S21 MTND3P2-201ENST00000438452 342 ntBASIC0.45□□□□□ -2.34
RAB40CQ96S21 RNU6-1023P-201ENST00000516137 106 ntBASIC0.45□□□□□ -2.34
RAB40CQ96S21 Y_RNA.680-201ENST00000516441 93 ntBASIC0.45□□□□□ -2.34
RAB40CQ96S21 AL162730.1-201ENST00000605734 292 ntBASIC0.45□□□□□ -2.34
RAB40CQ96S21 AC021613.1-201ENST00000623880 111 ntBASIC0.45□□□□□ -2.34
RAB40CQ96S21 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.45□□□□□ -2.34
RAB40CQ96S21 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 SNORA20.1-201ENST00000364790 130 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 RNU6-702P-201ENST00000364982 107 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 MIR598-201ENST00000384868 97 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 SNORD100-201ENST00000408573 76 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 SNORD93-201ENST00000408813 74 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.44□□□□□ -2.34
RAB40CQ96S21 RNU6-1149P-201ENST00000516810 97 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 SCARNA15-202ENST00000516881 127 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 MIR6841-201ENST00000637129 72 ntBASIC0.44□□□□□ -2.34
RAB40CQ96S21 SNORA22.1-201ENST00000362701 134 ntBASIC0.43□□□□□ -2.34
RAB40CQ96S21 SNORA25.7-201ENST00000364375 127 ntBASIC0.43□□□□□ -2.34
RAB40CQ96S21 RNU6-196P-201ENST00000384315 107 ntBASIC0.43□□□□□ -2.34
RAB40CQ96S21 RNU6-111P-201ENST00000517179 105 ntBASIC0.43□□□□□ -2.34
RAB40CQ96S21 MIR4714-201ENST00000580728 77 ntBASIC0.43□□□□□ -2.34
RAB40CQ96S21 Y_RNA.75-201ENST00000362927 97 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 RNU4-16P-201ENST00000364737 141 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 Y_RNA.412-201ENST00000384001 104 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 Y_RNA.447-201ENST00000384184 113 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 RNU4-83P-201ENST00000410863 133 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.42□□□□□ -2.34
RAB40CQ96S21 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 AC002350.1-201ENST00000490759 375 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 U6.106-201ENST00000636360 105 ntBASIC0.42□□□□□ -2.34
RAB40CQ96S21 Y_RNA.307-201ENST00000365022 117 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 Y_RNA.515-201ENST00000384535 112 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 Y_RNA.521-201ENST00000384560 114 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 RNU6-679P-201ENST00000391003 106 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 RNU6-448P-201ENST00000517052 107 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 MRPS18CP4-201ENST00000535821 231 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 AC141846.1-201ENST00000568348 142 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 MIR4503-201ENST00000582187 83 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 AC092634.7-201ENST00000621022 103 ntBASIC0.41□□□□□ -2.34
RAB40CQ96S21 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
RAB40CQ96S21 Y_RNA.193-201ENST00000363979 102 ntBASIC0.4□□□□□ -2.35
RAB40CQ96S21 RNA5SP117-201ENST00000365294 118 ntBASIC0.4□□□□□ -2.35
RAB40CQ96S21 Y_RNA.452-201ENST00000384202 108 ntBASIC0.4□□□□□ -2.35
RAB40CQ96S21 MIR489-201ENST00000384923 84 ntBASIC0.4□□□□□ -2.35
RAB40CQ96S21 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.4□□□□□ -2.35
RAB40CQ96S21 MIR3149-201ENST00000584629 83 ntBASIC0.4□□□□□ -2.35
RAB40CQ96S21 MIR6513-201ENST00000621188 64 ntBASIC0.4□□□□□ -2.35
RAB40CQ96S21 MTND5P32-201ENST00000560711 1802 ntBASIC0.4□□□□□ -2.35
RAB40CQ96S21 MIR411-201ENST00000362239 96 ntBASIC0.39□□□□□ -2.35
RAB40CQ96S21 Y_RNA.200-201ENST00000364018 102 ntBASIC0.39□□□□□ -2.35
RAB40CQ96S21 RNU6-918P-201ENST00000391219 106 ntBASIC0.39□□□□□ -2.35
RAB40CQ96S21 RNU6-893P-201ENST00000458841 100 ntBASIC0.39□□□□□ -2.35
RAB40CQ96S21 MIR7111-201ENST00000619751 72 ntBASIC0.39□□□□□ -2.35
RAB40CQ96S21 Y_RNA.42-201ENST00000362660 108 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 Y_RNA.83-201ENST00000363005 113 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 RNU6-403P-201ENST00000363163 104 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 RNU6-1336P-201ENST00000383886 109 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 RNY1P6-201ENST00000384193 109 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 RNU6-574P-201ENST00000384265 107 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 SNORA18-201ENST00000384416 132 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 RNU6-342P-201ENST00000384521 104 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 U8.15-201ENST00000390947 134 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
RAB40CQ96S21 MIR4431-201ENST00000579990 94 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms