Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 MIR5197-201ENST00000583721 112 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 SNORD92-201ENST00000585078 85 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 U6.90-201ENST00000614007 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 U6.70-201ENST00000620287 104 ntBASIC0.4□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.176-201ENST00000363815 109 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 RNU4-67P-201ENST00000364569 141 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-728P-201ENST00000365375 104 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-1160P-201ENST00000384546 104 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.542-201ENST00000384641 111 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.574-201ENST00000384766 95 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 RNU7-156P-201ENST00000517214 74 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 MIR4643-201ENST00000577473 78 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 AC006504.6-201ENST00000590142 199 ntBASIC0.39□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.326-201ENST00000365176 113 ntBASIC0.38□□□□□ -2.35
RPGRIP1Q96KN7 MIR548F4-201ENST00000408515 105 ntBASIC0.38□□□□□ -2.35
RPGRIP1Q96KN7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.38□□□□□ -2.35
RPGRIP1Q96KN7 AC002350.1-201ENST00000490759 375 ntBASIC0.38□□□□□ -2.35
RPGRIP1Q96KN7 AC091932.4-201ENST00000623386 200 ntBASIC0.38□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.262-201ENST00000364641 102 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-679P-201ENST00000391003 106 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 SNORA79-201ENST00000408376 140 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 RNA5SP261-201ENST00000410536 106 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 RNU7-80P-201ENST00000459562 61 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 AP003327.1-201ENST00000529684 127 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 AL365205.2-201ENST00000594586 68 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 AC011921.3-201ENST00000605540 361 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.54-201ENST00000362766 105 ntBASIC0.36□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.76-201ENST00000362931 109 ntBASIC0.36□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.352-201ENST00000365439 102 ntBASIC0.36□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-597P-201ENST00000365620 102 ntBASIC0.36□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.396-201ENST00000383949 103 ntBASIC0.36□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.618-201ENST00000410949 107 ntBASIC0.36□□□□□ -2.35
RPGRIP1Q96KN7 AL442067.1-201ENST00000613261 223 ntBASIC0.36□□□□□ -2.35
RPGRIP1Q96KN7 AL596211.1-201ENST00000569873 2277 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-103P-201ENST00000363686 107 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.277-201ENST00000364754 102 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 RNU6-1292P-201ENST00000383856 107 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 Y_RNA.454-201ENST00000384224 113 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 RNU4-43P-201ENST00000410628 137 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 AL662814.1-201ENST00000617364 121 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
RPGRIP1Q96KN7 RNA5SP517-201ENST00000364724 117 ntBASIC0.34□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.430-201ENST00000384081 110 ntBASIC0.34□□□□□ -2.36
RPGRIP1Q96KN7 MIR606-201ENST00000384851 96 ntBASIC0.34□□□□□ -2.36
RPGRIP1Q96KN7 SNORD93-201ENST00000408813 74 ntBASIC0.34□□□□□ -2.36
RPGRIP1Q96KN7 RNA5SP237-201ENST00000410414 113 ntBASIC0.34□□□□□ -2.36
RPGRIP1Q96KN7 SEPT7P4-201ENST00000437076 306 ntBASIC0.34□□□□□ -2.36
RPGRIP1Q96KN7 RNU6-448P-201ENST00000517052 107 ntBASIC0.34□□□□□ -2.36
RPGRIP1Q96KN7 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.34□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.292-201ENST00000364904 97 ntBASIC0.33□□□□□ -2.36
RPGRIP1Q96KN7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.33□□□□□ -2.36
RPGRIP1Q96KN7 AL121914.1-201ENST00000450188 156 ntBASIC0.33□□□□□ -2.36
RPGRIP1Q96KN7 RNA5SP94-201ENST00000516917 108 ntBASIC0.33□□□□□ -2.36
RPGRIP1Q96KN7 AL117187.1-201ENST00000555482 181 ntBASIC0.33□□□□□ -2.36
RPGRIP1Q96KN7 SNORA63-201ENST00000363450 132 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 RNA5SP117-201ENST00000365294 118 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 RNU2-38P-201ENST00000410856 79 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 RNU4-83P-201ENST00000410863 133 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 RPL39P25-201ENST00000449384 154 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 SNORA25.12-201ENST00000516202 82 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 RNY3P16-201ENST00000516338 101 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 MIR3152-201ENST00000579801 74 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 MIR4744-201ENST00000581563 82 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 AC008737.2-201ENST00000599446 118 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 MIR6718-201ENST00000616153 80 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 MIR8066-201ENST00000617280 78 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 MIR6759-201ENST00000638110 65 ntBASIC0.32□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.145-201ENST00000363527 102 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 RNU6-978P-201ENST00000364371 103 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 SNORA20-201ENST00000384662 132 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 MIR518A1-201ENST00000385068 85 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 SNORD116-25-201ENST00000516517 92 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 MIR3678-201ENST00000578455 94 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 MIR6841-201ENST00000637129 72 ntBASIC0.31□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.47-201ENST00000362697 108 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.308-201ENST00000365043 101 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 MIR329-2-201ENST00000385029 84 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 SNORD127-201ENST00000458892 86 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 MIR378D2-201ENST00000580636 98 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.812-201ENST00000610788 101 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.784-201ENST00000613803 101 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.787-201ENST00000616522 101 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.780-201ENST00000617336 101 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 Y_RNA.801-201ENST00000619005 101 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 AC021613.1-201ENST00000623880 111 ntBASIC0.3□□□□□ -2.36
RPGRIP1Q96KN7 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
RPGRIP1Q96KN7 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms