Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNU6-1062P-201ENST00000383908 107 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 RNU6-1053P-201ENST00000515930 101 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 RNU6-346P-201ENST00000516288 111 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 MIR3121-201ENST00000579680 77 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 MIR3152-201ENST00000579801 74 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 MIR4781-201ENST00000585250 76 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 AP001340.1-201ENST00000624405 217 ntBASIC0.84□□□□□ -2.27
PDLIM5Q96HC4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 RNY1P6-201ENST00000384193 109 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 SNORD12C-201ENST00000386307 89 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 MIR513C-201ENST00000401352 84 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 RNA5SP272-201ENST00000516095 111 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 SNORA25.12-201ENST00000516202 82 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 RNU6-1258P-201ENST00000516911 111 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 AC023827.1-201ENST00000569247 97 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 MIR4264-201ENST00000583520 66 ntBASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.83□□□□□ -2.28
PDLIM5Q96HC4 MIR377-201ENST00000362145 69 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 SNORD18B-201ENST00000365659 72 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 RNU6-205P-201ENST00000390858 107 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 SNORD111-201ENST00000408139 94 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 RNA5SP261-201ENST00000410536 106 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 MTATP6P21-201ENST00000440681 189 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 snoU13.2-201ENST00000459201 104 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.690-201ENST00000516603 95 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 AC011603.4-201ENST00000611325 277 ntBASIC0.82□□□□□ -2.28
PDLIM5Q96HC4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 SNORA20-201ENST00000384662 132 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 AC067940.1-201ENST00000458411 300 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.757-201ENST00000578934 114 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 AP000753.3-201ENST00000604083 169 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 uc_338.6-201ENST00000613544 171 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 MIR6740-201ENST00000618268 113 ntBASIC0.81□□□□□ -2.28
PDLIM5Q96HC4 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 SNORA22.1-201ENST00000362701 134 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 RNY1P10-201ENST00000363268 113 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 RNU4-16P-201ENST00000364737 141 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 RNU6-915P-201ENST00000364943 103 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.354-201ENST00000365448 111 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.420-201ENST00000384043 110 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 SNORA2B-201ENST00000384583 137 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 MIR588-201ENST00000384900 83 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 MIR563-201ENST00000385080 79 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 RNA5SP144-201ENST00000410846 116 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 snoU13.21-201ENST00000459368 105 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 RNU6-426P-201ENST00000516464 97 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 RNU6-113P-201ENST00000516653 101 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 AC108081.1-201ENST00000604358 221 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 AL136317.1-201ENST00000612653 226 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.8□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.171-201ENST00000363760 102 ntBASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 RNU6-690P-201ENST00000365242 106 ntBASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 U7.7-201ENST00000459276 60 ntBASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 RNU6-240P-201ENST00000516098 97 ntBASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 RNU2-35P-201ENST00000516446 142 ntBASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 RNU6-94P-201ENST00000607728 107 ntBASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
PDLIM5Q96HC4 AC010332.2-201ENST00000613083 1904 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 RNU6-369P-201ENST00000362515 102 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 SNORD115-2-201ENST00000362842 82 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 SNORD115-20-201ENST00000365099 82 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 AL512326.2-201ENST00000426359 151 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.676-201ENST00000516393 96 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 Y_RNA.692-201ENST00000516627 105 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 IGKV1-22-201ENST00000524313 326 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 AP001328.1-201ENST00000528550 176 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 MIR4305-201ENST00000583252 102 ntBASIC0.78□□□□□ -2.28
PDLIM5Q96HC4 MIR30D-201ENST00000362283 70 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 RNU6-774P-201ENST00000363238 107 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 Y_RNA.366-201ENST00000365540 102 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 RNU6-746P-201ENST00000384112 109 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 MTND4LP9-201ENST00000427694 174 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 RNU6-893P-201ENST00000458841 100 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 RNU7-62P-201ENST00000458856 62 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 AC133485.4-201ENST00000561835 220 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 AC138907.4-201ENST00000570107 226 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 MIR3133-201ENST00000583157 78 ntBASIC0.77□□□□□ -2.29
PDLIM5Q96HC4 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
PDLIM5Q96HC4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms