Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
DDX11Q96FC9 RNU4-69P-201ENST00000410677 143 ntBASIC2.11□□□□□ -2.07
DDX11Q96FC9 RPS3AP1-201ENST00000413190 320 ntBASIC2.11□□□□□ -2.07
DDX11Q96FC9 AC108667.1-201ENST00000428618 249 ntBASIC2.11□□□□□ -2.07
DDX11Q96FC9 RNU7-67P-201ENST00000459003 62 ntBASIC2.11□□□□□ -2.07
DDX11Q96FC9 RNU7-113P-201ENST00000459273 62 ntBASIC2.11□□□□□ -2.07
DDX11Q96FC9 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.11□□□□□ -2.07
DDX11Q96FC9 SNORA22.1-201ENST00000362701 134 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 Y_RNA.470-201ENST00000384307 117 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 Y_RNA.507-201ENST00000384500 99 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 AL353813.1-201ENST00000440700 253 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 RNU6-917P-201ENST00000516294 104 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 DEFB131E-201ENST00000532329 154 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 DNAJC19P9-201ENST00000555084 351 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 AL020996.3-201ENST00000606617 222 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 MIR6717-201ENST00000622747 73 ntBASIC2.1□□□□□ -2.07
DDX11Q96FC9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
DDX11Q96FC9 RNU4-36P-201ENST00000364294 144 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 Y_RNA.537-201ENST00000384626 109 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 RNA5SP261-201ENST00000410536 106 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 RNU6-592P-201ENST00000411333 103 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 HMGN1P33-201ENST00000432945 451 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 SNORA44.1-201ENST00000517031 108 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX11Q96FC9 MIR4694-201ENST00000578534 80 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 FAM106DP-201ENST00000586416 501 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 MIR4791-201ENST00000607666 84 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 AC243994.1-201ENST00000618627 109 ntBASIC2.09□□□□□ -2.07
DDX11Q96FC9 RNY3P2-201ENST00000362918 102 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 Y_RNA.107-201ENST00000363190 121 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 Y_RNA.220-201ENST00000364244 109 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 RNU4-67P-201ENST00000364569 141 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 RNA5SP173-201ENST00000364857 136 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 SNORD48-201ENST00000364953 64 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 Y_RNA.360-201ENST00000365512 102 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 RNU6-439P-201ENST00000384188 106 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 MIR194-1-201ENST00000384892 85 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 MIR577-201ENST00000385196 96 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 Y_RNA.601-201ENST00000410500 113 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 SNORD13-201ENST00000459299 104 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 SCARNA23-201ENST00000516060 130 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 AC022254.1-201ENST00000567857 235 ntBASIC2.08□□□□□ -2.08
DDX11Q96FC9 RNU6-360P-201ENST00000390944 104 ntBASIC2.07□□□□□ -2.08
DDX11Q96FC9 SNORA17.3-201ENST00000391159 129 ntBASIC2.07□□□□□ -2.08
DDX11Q96FC9 RNU6-733P-201ENST00000410759 104 ntBASIC2.07□□□□□ -2.08
DDX11Q96FC9 AC108729.3-201ENST00000513484 108 ntBASIC2.07□□□□□ -2.08
DDX11Q96FC9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.07□□□□□ -2.08
DDX11Q96FC9 RNU6-250P-201ENST00000516958 103 ntBASIC2.07□□□□□ -2.08
DDX11Q96FC9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.07□□□□□ -2.08
DDX11Q96FC9 MIR548AE2-201ENST00000583456 67 ntBASIC2.07□□□□□ -2.08
DDX11Q96FC9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.07□□□□□ -2.08
DDX11Q96FC9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX11Q96FC9 RNU6-832P-201ENST00000363319 107 ntBASIC2.06□□□□□ -2.08
DDX11Q96FC9 Y_RNA.155-201ENST00000363632 101 ntBASIC2.06□□□□□ -2.08
DDX11Q96FC9 RNU6-409P-201ENST00000384114 104 ntBASIC2.06□□□□□ -2.08
DDX11Q96FC9 RN7SKP12-201ENST00000516275 143 ntBASIC2.06□□□□□ -2.08
DDX11Q96FC9 RNA5SP33-201ENST00000516687 98 ntBASIC2.06□□□□□ -2.08
DDX11Q96FC9 SNORA74.3-201ENST00000517108 154 ntBASIC2.06□□□□□ -2.08
DDX11Q96FC9 MIR548Z-201ENST00000584743 97 ntBASIC2.06□□□□□ -2.08
DDX11Q96FC9 MIR8055-201ENST00000610739 97 ntBASIC2.06□□□□□ -2.08
DDX11Q96FC9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
DDX11Q96FC9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
DDX11Q96FC9 Y_RNA.10-201ENST00000362371 110 ntBASIC2.05□□□□□ -2.08
DDX11Q96FC9 Y_RNA.290-201ENST00000364879 114 ntBASIC2.05□□□□□ -2.08
DDX11Q96FC9 RNU6-573P-201ENST00000383938 106 ntBASIC2.05□□□□□ -2.08
DDX11Q96FC9 MIR605-201ENST00000385078 83 ntBASIC2.05□□□□□ -2.08
DDX11Q96FC9 AC096949.1-201ENST00000412047 152 ntBASIC2.05□□□□□ -2.08
DDX11Q96FC9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.05□□□□□ -2.08
DDX11Q96FC9 snoU13.16-201ENST00000459350 104 ntBASIC2.05□□□□□ -2.08
DDX11Q96FC9 FAM71BP1-201ENST00000604431 523 ntBASIC2.05□□□□□ -2.08
DDX11Q96FC9 MIR1245B-201ENST00000636115 69 ntBASIC2.05□□□□□ -2.08
DDX11Q96FC9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
DDX11Q96FC9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
DDX11Q96FC9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 RNY1P10-201ENST00000363268 113 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 RNU6-616P-201ENST00000384353 107 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 RNU6-679P-201ENST00000391003 106 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 RNU6-1275P-201ENST00000391087 107 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 Y_RNA.593-201ENST00000410292 98 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 AL161935.2-201ENST00000414627 60 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 MIR4498-201ENST00000577599 66 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 AC012531.4-201ENST00000616509 177 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.04□□□□□ -2.08
DDX11Q96FC9 MIR494-201ENST00000349529 81 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 MIR378A-201ENST00000362177 66 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 Y_RNA.377-201ENST00000365644 108 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 SNORD77B-201ENST00000391112 67 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 RNU7-61P-201ENST00000515897 61 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 RNU6-795P-201ENST00000516323 103 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 RNU7-43P-201ENST00000516554 64 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 RNU6-1018P-201ENST00000516577 106 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 AC026421.1-201ENST00000519101 163 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 MIR502-201ENST00000606349 86 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 AC091304.10-201ENST00000641554 121 ntBASIC2.03□□□□□ -2.08
DDX11Q96FC9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
DDX11Q96FC9 RNU6-1053P-201ENST00000515930 101 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms