Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 SNORD115-18-201ENST00000363293 82 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 SNORD115-17-201ENST00000364612 82 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 MIR5009-201ENST00000578736 100 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 AP000942.3-201ENST00000603702 160 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 MIR8063-201ENST00000621930 81 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 MIR1255B1-201ENST00000636325 63 ntBASIC1.58□□□□□ -2.16
PTCD3Q96EY7 Y_RNA.49-201ENST00000362714 112 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 Y_RNA.163-201ENST00000363702 113 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 Y_RNA.299-201ENST00000364973 94 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 AL031737.1-201ENST00000450125 223 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 RNA5SP445-201ENST00000515889 115 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 AL162726.3-218ENST00000636401 95 ntBASIC1.57□□□□□ -2.16
PTCD3Q96EY7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
PTCD3Q96EY7 RNA5SP99-201ENST00000364020 114 ntBASIC1.56□□□□□ -2.16
PTCD3Q96EY7 RNU6-342P-201ENST00000384521 104 ntBASIC1.56□□□□□ -2.16
PTCD3Q96EY7 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
PTCD3Q96EY7 SNORA44.1-201ENST00000517031 108 ntBASIC1.56□□□□□ -2.16
PTCD3Q96EY7 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
PTCD3Q96EY7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PTCD3Q96EY7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
PTCD3Q96EY7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
PTCD3Q96EY7 Y_RNA.309-201ENST00000365046 111 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 SNORA32-201ENST00000384072 121 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 RNU6-816P-201ENST00000390914 107 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 RNU6-1268P-201ENST00000391214 107 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 RNU6-1239P-201ENST00000391310 107 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 RNA5SP89-201ENST00000410300 108 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 AC244023.1-201ENST00000426884 112 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 AP003716.2-201ENST00000528260 108 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 AL357312.1-201ENST00000603879 298 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 AC242498.1-201ENST00000604134 111 ntBASIC1.55□□□□□ -2.16
PTCD3Q96EY7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
PTCD3Q96EY7 RNU6-1298P-201ENST00000362456 101 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 SNORA25.3-201ENST00000363205 127 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 Y_RNA.328-201ENST00000365208 113 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 RNU6-616P-201ENST00000384353 107 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 AC245047.7-201ENST00000440265 293 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 RNA5SP458-201ENST00000516188 119 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 RNU6-168P-201ENST00000516189 101 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
PTCD3Q96EY7 RNU6-363P-201ENST00000362895 105 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 RNA5SP48-201ENST00000363969 126 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 SNORA18-201ENST00000384416 132 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 MIR1302-5-201ENST00000408164 150 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 AL353813.1-201ENST00000440700 253 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 RNU6-947P-201ENST00000516264 106 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 RNU6-165P-201ENST00000517170 99 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 CYP3A52P-201ENST00000563326 91 ntBASIC1.53□□□□□ -2.16
PTCD3Q96EY7 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
PTCD3Q96EY7 RNU6-766P-201ENST00000362478 107 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 RNU6-756P-201ENST00000383997 107 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 SNORA51.5-201ENST00000384126 131 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 Y_RNA.495-201ENST00000384435 112 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 SNORD38B-201ENST00000384690 67 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 SNORA19.1-201ENST00000410656 129 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 AL603825.1-201ENST00000438481 80 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 RPL39P25-201ENST00000449384 154 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 RNU7-35P-201ENST00000517174 62 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 RNU6-537P-201ENST00000517277 103 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 MIR3664-201ENST00000579074 99 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 SNORD38B-202ENST00000625943 69 ntBASIC1.52□□□□□ -2.17
PTCD3Q96EY7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
PTCD3Q96EY7 MIR1185-1-201ENST00000408598 86 ntBASIC1.51□□□□□ -2.17
PTCD3Q96EY7 MIR1912-201ENST00000410389 80 ntBASIC1.51□□□□□ -2.17
PTCD3Q96EY7 AL133373.1-201ENST00000497098 94 ntBASIC1.51□□□□□ -2.17
PTCD3Q96EY7 MIR3198-2-201ENST00000577868 80 ntBASIC1.51□□□□□ -2.17
PTCD3Q96EY7 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
PTCD3Q96EY7 RNU4-67P-201ENST00000364569 141 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 RNU6-32P-201ENST00000383948 107 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 RNU6-13P-201ENST00000384248 107 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 RNU6-12P-201ENST00000384604 107 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 RNU6-41P-201ENST00000384741 107 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 MIR590-201ENST00000385008 97 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 MIR605-201ENST00000385078 83 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 SNORD77B-201ENST00000391112 67 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
PTCD3Q96EY7 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.5□□□□□ -2.17
PTCD3Q96EY7 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
PTCD3Q96EY7 Y_RNA.78-201ENST00000362970 110 ntBASIC1.49□□□□□ -2.17
PTCD3Q96EY7 RNA5SP190-201ENST00000365222 118 ntBASIC1.49□□□□□ -2.17
PTCD3Q96EY7 RNU6-679P-201ENST00000391003 106 ntBASIC1.49□□□□□ -2.17
PTCD3Q96EY7 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
PTCD3Q96EY7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms