Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AP000553.5-201ENST00000641933 54 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 RNU6-509P-201ENST00000363519 107 ntBASIC2.02□□□□□ -2.09
CHFRQ96EP1 SNORA26.6-201ENST00000391256 115 ntBASIC2.02□□□□□ -2.09
CHFRQ96EP1 AC090844.1-201ENST00000422019 156 ntBASIC2.02□□□□□ -2.09
CHFRQ96EP1 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
CHFRQ96EP1 AC073261.1-201ENST00000429409 121 ntBASIC2.02□□□□□ -2.09
CHFRQ96EP1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.02□□□□□ -2.09
CHFRQ96EP1 UBL5P1-201ENST00000507979 193 ntBASIC2.02□□□□□ -2.09
CHFRQ96EP1 RNA5SP182-201ENST00000516064 82 ntBASIC2.02□□□□□ -2.09
CHFRQ96EP1 AC022513.1-201ENST00000624512 117 ntBASIC2.02□□□□□ -2.09
CHFRQ96EP1 SNORD116-10-201ENST00000363791 102 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 MIR889-201ENST00000401280 79 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 RNU6-1190P-201ENST00000410811 104 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.01□□□□□ -2.09
CHFRQ96EP1 AC015922.2-201ENST00000435593 184 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 RNA5SP33-201ENST00000516687 98 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 RNU7-28P-201ENST00000516759 62 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 RNU6-1006P-201ENST00000516998 103 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 AL512310.12-203ENST00000640543 90 ntBASIC2.01□□□□□ -2.09
CHFRQ96EP1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
CHFRQ96EP1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
CHFRQ96EP1 RNU6-633P-201ENST00000362612 103 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 SNORA22.1-201ENST00000362701 134 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 RNA5SP493-201ENST00000364115 91 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 RNU6-1163P-201ENST00000364516 107 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 Y_RNA.316-201ENST00000365118 111 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 Y_RNA.430-201ENST00000384081 110 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 RNU6-163P-201ENST00000384396 106 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 RNU6-1307P-201ENST00000391012 103 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 RNA5SP465-201ENST00000391195 109 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2□□□□□ -2.09
CHFRQ96EP1 STAG3L5P-204ENST00000443759 179 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 AC108729.3-201ENST00000513484 108 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 SNORA31.10-201ENST00000516482 106 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2□□□□□ -2.09
CHFRQ96EP1 MIR3169-201ENST00000578032 83 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 MIR4439-201ENST00000583746 80 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 AC103810.7-201ENST00000607821 91 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 SEPT14P17-201ENST00000617978 177 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 MIR8054-201ENST00000620877 86 ntBASIC2□□□□□ -2.09
CHFRQ96EP1 SNORA1.1-201ENST00000364671 133 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 RNU6-160P-201ENST00000384591 107 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 MIR1267-201ENST00000408723 78 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 Y_RNA.607-201ENST00000410597 98 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 RPS29P11-201ENST00000496507 171 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 RNU6-86P-201ENST00000606534 107 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
CHFRQ96EP1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.98□□□□□ -2.09
CHFRQ96EP1 SNORD115-27-201ENST00000364430 82 ntBASIC1.98□□□□□ -2.09
CHFRQ96EP1 SNORA32-201ENST00000384072 121 ntBASIC1.98□□□□□ -2.09
CHFRQ96EP1 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
CHFRQ96EP1 RNU6-788P-201ENST00000390967 104 ntBASIC1.98□□□□□ -2.09
CHFRQ96EP1 SNORD77B-201ENST00000391112 67 ntBASIC1.98□□□□□ -2.09
CHFRQ96EP1 RNU7-34P-201ENST00000459394 64 ntBASIC1.98□□□□□ -2.09
CHFRQ96EP1 AC027279.3-201ENST00000625055 122 ntBASIC1.98□□□□□ -2.09
CHFRQ96EP1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHFRQ96EP1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CHFRQ96EP1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.97□□□□□ -2.09
CHFRQ96EP1 U8.16-201ENST00000391279 133 ntBASIC1.97□□□□□ -2.09
CHFRQ96EP1 Y_RNA.609-201ENST00000410669 89 ntBASIC1.97□□□□□ -2.09
CHFRQ96EP1 AC108667.1-201ENST00000428618 249 ntBASIC1.97□□□□□ -2.09
CHFRQ96EP1 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
CHFRQ96EP1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.97□□□□□ -2.09
CHFRQ96EP1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
CHFRQ96EP1 AC096720.1-201ENST00000604441 183 ntBASIC1.97□□□□□ -2.09
CHFRQ96EP1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CHFRQ96EP1 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
CHFRQ96EP1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CHFRQ96EP1 RNU6-913P-201ENST00000390913 95 ntBASIC1.96□□□□□ -2.1
CHFRQ96EP1 RNU11-3P-201ENST00000391111 133 ntBASIC1.96□□□□□ -2.1
CHFRQ96EP1 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
CHFRQ96EP1 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
CHFRQ96EP1 RNU6-958P-201ENST00000516995 106 ntBASIC1.96□□□□□ -2.1
CHFRQ96EP1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.96□□□□□ -2.1
CHFRQ96EP1 MIR6717-201ENST00000622747 73 ntBASIC1.96□□□□□ -2.1
CHFRQ96EP1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.96□□□□□ -2.1
CHFRQ96EP1 RNU6-1229P-201ENST00000364295 107 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 SNORA24-201ENST00000384096 131 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 RNU6-524P-201ENST00000384270 107 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 RNU6-424P-201ENST00000384367 105 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 RNU6-613P-201ENST00000410412 108 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 MIR3152-201ENST00000579801 74 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 MIR4712-201ENST00000583750 82 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 AC020891.4-201ENST00000605745 93 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 MIR4791-201ENST00000607666 84 ntBASIC1.95□□□□□ -2.1
CHFRQ96EP1 AC245060.5-201ENST00000610778 3293 ntBASIC1.94□□□□□ -2.1
CHFRQ96EP1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHFRQ96EP1 RNU6-833P-201ENST00000363486 107 ntBASIC1.94□□□□□ -2.1
CHFRQ96EP1 MIR516B2-201ENST00000385190 85 ntBASIC1.94□□□□□ -2.1
CHFRQ96EP1 RNU7-2P-201ENST00000516096 62 ntBASIC1.94□□□□□ -2.1
CHFRQ96EP1 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
CHFRQ96EP1 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
CHFRQ96EP1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.94□□□□□ -2.1
CHFRQ96EP1 AL020996.3-201ENST00000606617 222 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms