Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RPS27P16-201ENST00000425758 201 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 AL512326.2-201ENST00000426359 151 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 RNU7-164P-201ENST00000459221 62 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 RNU7-53P-201ENST00000516705 60 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 MIR4305-201ENST00000583252 102 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 MIR6078-201ENST00000611069 100 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 MIR6717-201ENST00000622747 73 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 MIR4251-201ENST00000635819 61 ntBASIC1.29□□□□□ -2.2
RTP4Q96DX8 Y_RNA.116-201ENST00000363292 103 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 SNORA70.7-201ENST00000384159 133 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 RNU6-1319P-201ENST00000390855 104 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 RNU6-747P-201ENST00000390928 104 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 RNU6-241P-201ENST00000391148 104 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 RNU6-177P-201ENST00000411257 104 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 RNA5SP102-201ENST00000516865 106 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 MIR3937-201ENST00000580135 106 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 MIR6129-201ENST00000616087 109 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 MIR6841-201ENST00000637129 72 ntBASIC1.28□□□□□ -2.2
RTP4Q96DX8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RTP4Q96DX8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RTP4Q96DX8 Y_RNA.224-201ENST00000364308 111 ntBASIC1.27□□□□□ -2.21
RTP4Q96DX8 SNORD20-201ENST00000384550 80 ntBASIC1.27□□□□□ -2.21
RTP4Q96DX8 snoU13.16-201ENST00000459350 104 ntBASIC1.27□□□□□ -2.21
RTP4Q96DX8 MTND5P34-201ENST00000568888 325 ntBASIC1.27□□□□□ -2.21
RTP4Q96DX8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.27□□□□□ -2.21
RTP4Q96DX8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.27□□□□□ -2.21
RTP4Q96DX8 RNU6-215P-201ENST00000365169 102 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 Y_RNA.346-201ENST00000365385 112 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 RNU6-1056P-201ENST00000383996 107 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 RNU6-1144P-201ENST00000384247 104 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 Y_RNA.470-201ENST00000384307 117 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 RNU6-476P-201ENST00000384726 107 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 MIR548A1-201ENST00000385041 97 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 MIR518E-201ENST00000385252 88 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 RNU6-1064P-201ENST00000410626 104 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 RNA5SP136-201ENST00000410906 107 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
RTP4Q96DX8 RNU6-970P-201ENST00000516312 107 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 AL512310.8-201ENST00000550183 120 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 MIR3664-201ENST00000579074 99 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 AL121890.5-201ENST00000620848 304 ntBASIC1.26□□□□□ -2.21
RTP4Q96DX8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
RTP4Q96DX8 SNORA22.1-201ENST00000362701 134 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 SNORA1.1-201ENST00000364671 133 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 RNU6-1067P-201ENST00000384752 107 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 RNU6-602P-201ENST00000411155 105 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 COX6CP6-201ENST00000490840 228 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 AC004812.1-201ENST00000540773 146 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 AL670379.3-201ENST00000605040 251 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 Z97988.1-201ENST00000637697 135 ntBASIC1.25□□□□□ -2.21
RTP4Q96DX8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
RTP4Q96DX8 Y_RNA.191-201ENST00000363972 113 ntBASIC1.24□□□□□ -2.21
RTP4Q96DX8 MIR1270-201ENST00000459320 83 ntBASIC1.24□□□□□ -2.21
RTP4Q96DX8 AP003716.2-201ENST00000528260 108 ntBASIC1.24□□□□□ -2.21
RTP4Q96DX8 AL357312.1-201ENST00000603879 298 ntBASIC1.24□□□□□ -2.21
RTP4Q96DX8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RTP4Q96DX8 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
RTP4Q96DX8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RTP4Q96DX8 Y_RNA.35-201ENST00000362601 101 ntBASIC1.23□□□□□ -2.21
RTP4Q96DX8 RNU6-1325P-201ENST00000364905 105 ntBASIC1.23□□□□□ -2.21
RTP4Q96DX8 Y_RNA.549-201ENST00000384657 102 ntBASIC1.23□□□□□ -2.21
RTP4Q96DX8 SNORD12C-201ENST00000386307 89 ntBASIC1.23□□□□□ -2.21
RTP4Q96DX8 MIR1185-1-201ENST00000408598 86 ntBASIC1.23□□□□□ -2.21
RTP4Q96DX8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.23□□□□□ -2.21
RTP4Q96DX8 AC244023.1-201ENST00000426884 112 ntBASIC1.23□□□□□ -2.21
RTP4Q96DX8 Y_RNA.649-201ENST00000459077 103 ntBASIC1.23□□□□□ -2.21
RTP4Q96DX8 AC242498.1-201ENST00000604134 111 ntBASIC1.23□□□□□ -2.21
RTP4Q96DX8 Y_RNA.198-201ENST00000364013 98 ntBASIC1.22□□□□□ -2.21
RTP4Q96DX8 Y_RNA.430-201ENST00000384081 110 ntBASIC1.22□□□□□ -2.21
RTP4Q96DX8 RNU6-342P-201ENST00000384521 104 ntBASIC1.22□□□□□ -2.21
RTP4Q96DX8 Y_RNA.531-201ENST00000384589 121 ntBASIC1.22□□□□□ -2.21
RTP4Q96DX8 MIR548A3-201ENST00000385297 97 ntBASIC1.22□□□□□ -2.21
RTP4Q96DX8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
RTP4Q96DX8 AL022718.1-201ENST00000412004 84 ntBASIC1.22□□□□□ -2.21
RTP4Q96DX8 RPS3AP1-201ENST00000413190 320 ntBASIC1.22□□□□□ -2.21
RTP4Q96DX8 MIR4452-201ENST00000583004 71 ntBASIC1.22□□□□□ -2.21
RTP4Q96DX8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.22□□□□□ -2.21
RTP4Q96DX8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.22□□□□□ -2.21
RTP4Q96DX8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTP4Q96DX8 RNA5SP48-201ENST00000363969 126 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 RNU6-654P-201ENST00000364373 107 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 RNU7-113P-201ENST00000459273 62 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 RPS23P4-201ENST00000487908 423 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 AC113410.1-201ENST00000505029 247 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 RNU6-589P-201ENST00000516485 107 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 RNU6-919P-201ENST00000516731 104 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 MIR3152-201ENST00000579801 74 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 MIR548AE2-201ENST00000583456 67 ntBASIC1.21□□□□□ -2.22
RTP4Q96DX8 AL035470.1-201ENST00000622571 220 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms