Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 SNORA40.8-201ENST00000411034 126 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 SNORD71-201ENST00000411292 86 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 RNA5SP94-201ENST00000516917 108 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 RNU7-70P-201ENST00000516941 66 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 AL442067.1-201ENST00000613261 223 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 AL662814.1-201ENST00000617364 121 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 MIR924-201ENST00000638017 53 ntBASIC0.31□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.54-201ENST00000362766 105 ntBASIC0.3□□□□□ -2.36
RAB39BQ96DA2 RNU6-472P-201ENST00000384299 107 ntBASIC0.3□□□□□ -2.36
RAB39BQ96DA2 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
RAB39BQ96DA2 RNU4-83P-201ENST00000410863 133 ntBASIC0.3□□□□□ -2.36
RAB39BQ96DA2 SEPT7P4-201ENST00000437076 306 ntBASIC0.3□□□□□ -2.36
RAB39BQ96DA2 AL121914.1-201ENST00000450188 156 ntBASIC0.3□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.277-201ENST00000364754 102 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 MIR548F4-201ENST00000408515 105 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 SNORD116-25-201ENST00000516517 92 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 MIR4643-201ENST00000577473 78 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 MIR3678-201ENST00000578455 94 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 MIR4744-201ENST00000581563 82 ntBASIC0.29□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.292-201ENST00000364904 97 ntBASIC0.28□□□□□ -2.36
RAB39BQ96DA2 Y_RNA.326-201ENST00000365176 113 ntBASIC0.28□□□□□ -2.36
RAB39BQ96DA2 RNU6-597P-201ENST00000365620 102 ntBASIC0.28□□□□□ -2.36
RAB39BQ96DA2 SNORA62.5-201ENST00000516634 120 ntBASIC0.28□□□□□ -2.36
RAB39BQ96DA2 MIR8066-201ENST00000617280 78 ntBASIC0.28□□□□□ -2.36
RAB39BQ96DA2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.27□□□□□ -2.37
RAB39BQ96DA2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.396-201ENST00000383949 103 ntBASIC0.27□□□□□ -2.37
RAB39BQ96DA2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.27□□□□□ -2.37
RAB39BQ96DA2 AP003327.1-201ENST00000529684 127 ntBASIC0.27□□□□□ -2.37
RAB39BQ96DA2 AC022523.2-201ENST00000561045 150 ntBASIC0.27□□□□□ -2.37
RAB39BQ96DA2 AC021613.1-201ENST00000623880 111 ntBASIC0.27□□□□□ -2.37
RAB39BQ96DA2 MIR330-201ENST00000362196 94 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 SNORA22.1-201ENST00000362701 134 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.76-201ENST00000362931 109 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 MIR606-201ENST00000384851 96 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 RNU6-469P-201ENST00000516253 101 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 AC141846.1-201ENST00000568348 142 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 MIR378D2-201ENST00000580636 98 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 AC011921.3-201ENST00000605540 361 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 SNORA25.18-201ENST00000607153 114 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 MIR6841-201ENST00000637129 72 ntBASIC0.26□□□□□ -2.37
RAB39BQ96DA2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
RAB39BQ96DA2 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 RNU6-403P-201ENST00000363163 104 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 SNORA63-201ENST00000363450 132 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.145-201ENST00000363527 102 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 RNU6-978P-201ENST00000364371 103 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 SNORA8.2-201ENST00000384372 139 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 U8.15-201ENST00000390947 134 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 RNU6-578P-201ENST00000390980 103 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 MIR548H3-201ENST00000408771 118 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 RNA5SP127-201ENST00000411051 133 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 AL117187.1-201ENST00000555482 181 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 AC133485.4-201ENST00000561835 220 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
RAB39BQ96DA2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
RAB39BQ96DA2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.24□□□□□ -2.37
RAB39BQ96DA2 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.308-201ENST00000365043 101 ntBASIC0.24□□□□□ -2.37
RAB39BQ96DA2 RNU2-38P-201ENST00000410856 79 ntBASIC0.24□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.24□□□□□ -2.37
RAB39BQ96DA2 SNRPGP12-201ENST00000449481 213 ntBASIC0.24□□□□□ -2.37
RAB39BQ96DA2 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
RAB39BQ96DA2 AC008737.2-201ENST00000599446 118 ntBASIC0.24□□□□□ -2.37
RAB39BQ96DA2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.24□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.47-201ENST00000362697 108 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.149-201ENST00000363558 117 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.515-201ENST00000384535 112 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 RNU6-893P-201ENST00000458841 100 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.23□□□□□ -2.37
RAB39BQ96DA2 RNY3P16-201ENST00000516338 101 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.812-201ENST00000610788 101 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 MIR6082-201ENST00000613604 109 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.784-201ENST00000613803 101 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.787-201ENST00000616522 101 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.780-201ENST00000617336 101 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.801-201ENST00000619005 101 ntBASIC0.23□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.288-201ENST00000364854 92 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 RNU6-716P-201ENST00000365621 103 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 RNU6-949P-201ENST00000384040 107 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 MIR624-201ENST00000385217 97 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 RNU6-493P-201ENST00000391321 108 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 AL512326.2-201ENST00000426359 151 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 SNORD127-201ENST00000458892 86 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.797-201ENST00000515977 94 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 RNU2-4P-201ENST00000606190 192 ntBASIC0.22□□□□□ -2.37
RAB39BQ96DA2 Y_RNA.121-201ENST00000363309 113 ntBASIC0.21□□□□□ -2.38
RAB39BQ96DA2 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
RAB39BQ96DA2 SNORA18-201ENST00000384416 132 ntBASIC0.21□□□□□ -2.38
RAB39BQ96DA2 MIR644A-201ENST00000385262 94 ntBASIC0.21□□□□□ -2.38
RAB39BQ96DA2 RNU5E-9P-201ENST00000411164 104 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms