Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 RNA5SP261-201ENST00000410536 106 ntBASIC0.92□□□□□ -2.26
SEMA4DQ92854 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.92□□□□□ -2.26
SEMA4DQ92854 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
SEMA4DQ92854 RNU6-346P-201ENST00000516288 111 ntBASIC0.92□□□□□ -2.26
SEMA4DQ92854 Y_RNA.686-201ENST00000516548 134 ntBASIC0.92□□□□□ -2.26
SEMA4DQ92854 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
SEMA4DQ92854 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.92□□□□□ -2.26
SEMA4DQ92854 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.92□□□□□ -2.26
SEMA4DQ92854 AP000753.3-201ENST00000604083 169 ntBASIC0.92□□□□□ -2.26
SEMA4DQ92854 RNU6-508P-201ENST00000363231 103 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 Y_RNA.120-201ENST00000363304 110 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 Y_RNA.488-201ENST00000384403 102 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 SNORA2B-201ENST00000384583 137 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 MIR1276-201ENST00000408707 83 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 RPS3AP1-201ENST00000413190 320 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 AC021613.1-201ENST00000623880 111 ntBASIC0.91□□□□□ -2.26
SEMA4DQ92854 SNORD18B-201ENST00000365659 72 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 RNY1P5-201ENST00000383890 115 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 SNORA20-201ENST00000384662 132 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 MIR563-201ENST00000385080 79 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 RNU6-205P-201ENST00000390858 107 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 MIR942-201ENST00000401111 86 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 FABP5P4-201ENST00000437203 171 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 MTATP6P21-201ENST00000440681 189 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 RNA5SP272-201ENST00000516095 111 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 RNU6-94P-201ENST00000607728 107 ntBASIC0.9□□□□□ -2.27
SEMA4DQ92854 RNU6-349P-201ENST00000362402 107 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 RNU6-309P-201ENST00000364573 106 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 Y_RNA.420-201ENST00000384043 110 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 AL603914.1-201ENST00000401964 204 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
SEMA4DQ92854 snoU13.2-201ENST00000459201 104 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 RNU6-426P-201ENST00000516464 97 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 Y_RNA.690-201ENST00000516603 95 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 MIR3152-201ENST00000579801 74 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 MIR8070-201ENST00000616510 88 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 MIR6740-201ENST00000618268 113 ntBASIC0.89□□□□□ -2.27
SEMA4DQ92854 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.89□□□□□ -2.27
SEMA4DQ92854 RNU6-774P-201ENST00000363238 107 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 RNU4-16P-201ENST00000364737 141 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 RNU6-915P-201ENST00000364943 103 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 Y_RNA.354-201ENST00000365448 111 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 RNY1P6-201ENST00000384193 109 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 MIR499A-201ENST00000384903 122 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 Y_RNA.651-201ENST00000459380 103 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 RNA5SP255-201ENST00000516370 107 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 MIR3133-201ENST00000583157 78 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 AC011603.4-201ENST00000611325 277 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 uc_338.6-201ENST00000613544 171 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.88□□□□□ -2.27
SEMA4DQ92854 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SEMA4DQ92854 RNU6-369P-201ENST00000362515 102 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 SNORD114-22-201ENST00000365423 72 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 MIR1287-201ENST00000408492 90 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 RNU6-994P-201ENST00000410507 111 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 AP001328.1-201ENST00000528550 176 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 AP001340.1-201ENST00000624405 217 ntBASIC0.87□□□□□ -2.27
SEMA4DQ92854 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 RNU6-690P-201ENST00000365242 106 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 Y_RNA.343-201ENST00000365354 112 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 MIR588-201ENST00000384900 83 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 SNORD12C-201ENST00000386307 89 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 MIR1827-201ENST00000408549 66 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 AC067940.1-201ENST00000458411 300 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 RNU7-62P-201ENST00000458856 62 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 U7.7-201ENST00000459276 60 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 snoU13.21-201ENST00000459368 105 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 RNU5E-3P-201ENST00000515913 68 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 RNU6-1110P-201ENST00000516462 101 ntBASIC0.86□□□□□ -2.27
SEMA4DQ92854 AC010332.2-201ENST00000613083 1904 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 SNORA22.1-201ENST00000362701 134 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 Y_RNA.226-201ENST00000364337 114 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 RNU6-746P-201ENST00000384112 109 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 Y_RNA.568-201ENST00000384742 113 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 MIR18B-201ENST00000454574 71 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 RNU6-893P-201ENST00000458841 100 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 RNU6-240P-201ENST00000516098 97 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 Y_RNA.692-201ENST00000516627 105 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 Y_RNA.703-201ENST00000516846 111 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 MIR3121-201ENST00000579680 77 ntBASIC0.85□□□□□ -2.27
SEMA4DQ92854 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
SEMA4DQ92854 MIR30D-201ENST00000362283 70 ntBASIC0.84□□□□□ -2.27
SEMA4DQ92854 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
SEMA4DQ92854 RNU6-1165P-201ENST00000410119 107 ntBASIC0.84□□□□□ -2.27
SEMA4DQ92854 RNA5SP144-201ENST00000410846 116 ntBASIC0.84□□□□□ -2.27
SEMA4DQ92854 Y_RNA.757-201ENST00000578934 114 ntBASIC0.84□□□□□ -2.27
SEMA4DQ92854 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
SEMA4DQ92854 AC108081.1-201ENST00000604358 221 ntBASIC0.84□□□□□ -2.27
SEMA4DQ92854 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
SEMA4DQ92854 Y_RNA.224-201ENST00000364308 111 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms