Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.4□□□□□ -2.35
TRAF3IP1Q8TDR0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
TRAF3IP1Q8TDR0 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
TRAF3IP1Q8TDR0 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU6-978P-201ENST00000364371 103 ntBASIC0.39□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU6-597P-201ENST00000365620 102 ntBASIC0.39□□□□□ -2.35
TRAF3IP1Q8TDR0 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
TRAF3IP1Q8TDR0 AC092634.7-201ENST00000621022 103 ntBASIC0.39□□□□□ -2.35
TRAF3IP1Q8TDR0 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
TRAF3IP1Q8TDR0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.20-201ENST00000362479 113 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.182-201ENST00000363880 111 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.350-201ENST00000365409 98 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 SNORA20-201ENST00000384662 132 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 RNA5SP237-201ENST00000410414 113 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 AL118496.2-201ENST00000448300 230 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.668-201ENST00000516233 93 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU6-1045P-201ENST00000516321 107 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 MIR4308-201ENST00000580634 81 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 MIR3128-201ENST00000581957 66 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
TRAF3IP1Q8TDR0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.121-201ENST00000363309 113 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU1-133P-201ENST00000364867 167 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.571-201ENST00000384753 98 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 MIR216A-201ENST00000385063 110 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU6-679P-201ENST00000391003 106 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 SNORD58.1-201ENST00000391313 66 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 SNORD93-201ENST00000408813 74 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 RNA5SP127-201ENST00000411051 133 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU6-448P-201ENST00000517052 107 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 SNORA4-201ENST00000584302 138 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 AC062037.2-201ENST00000610137 73 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 AL662814.1-201ENST00000617364 121 ntBASIC0.37□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU6-643P-201ENST00000384018 107 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.478-201ENST00000384358 107 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU4-70P-201ENST00000384579 139 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 RPL39P25-201ENST00000449384 154 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.680-201ENST00000516441 93 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 RNA5SP94-201ENST00000516917 108 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 U4.1-201ENST00000620349 87 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 AC021613.1-201ENST00000623880 111 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 MIR6841-201ENST00000637129 72 ntBASIC0.36□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.226-201ENST00000364337 114 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 RNA5SP117-201ENST00000365294 118 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 MIR624-201ENST00000385217 97 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 RNA5SP220-201ENST00000516298 104 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 RNU6-1149P-201ENST00000516810 97 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 SCARNA15-202ENST00000516881 127 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 AP003327.1-201ENST00000529684 127 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 MIR8066-201ENST00000617280 78 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 uc_338.16-201ENST00000621804 95 ntBASIC0.35□□□□□ -2.35
TRAF3IP1Q8TDR0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORA22.1-201ENST00000362701 134 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 RNA5SP517-201ENST00000364724 117 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORA20.1-201ENST00000364790 130 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 MIR1287-201ENST00000408492 90 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU4-83P-201ENST00000410863 133 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORA40.8-201ENST00000411034 126 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 U6.106-201ENST00000636360 105 ntBASIC0.34□□□□□ -2.36
TRAF3IP1Q8TDR0 Y_RNA.60-201ENST00000362831 98 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU6-403P-201ENST00000363163 104 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORA25.7-201ENST00000364375 127 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU4-16P-201ENST00000364737 141 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU6-275P-201ENST00000364910 107 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 Y_RNA.521-201ENST00000384560 114 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU6-1023P-201ENST00000516137 106 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU4-71P-201ENST00000516258 113 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU6-111P-201ENST00000517179 105 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 MRPS18CP4-201ENST00000535821 231 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 AC141846.1-201ENST00000568348 142 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 MIR3678-201ENST00000578455 94 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 MIR4503-201ENST00000582187 83 ntBASIC0.33□□□□□ -2.36
TRAF3IP1Q8TDR0 MTND5P32-201ENST00000560711 1802 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU6-1336P-201ENST00000383886 109 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 Y_RNA.412-201ENST00000384001 104 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 Y_RNA.447-201ENST00000384184 113 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 U8.15-201ENST00000390947 134 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 MTND3P2-201ENST00000438452 342 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORA25.12-201ENST00000516202 82 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 MIR4711-201ENST00000578274 70 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 MIR6734-201ENST00000621166 68 ntBASIC0.32□□□□□ -2.36
TRAF3IP1Q8TDR0 Y_RNA.75-201ENST00000362927 97 ntBASIC0.31□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU6-702P-201ENST00000364982 107 ntBASIC0.31□□□□□ -2.36
TRAF3IP1Q8TDR0 RNU6-196P-201ENST00000384315 107 ntBASIC0.31□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORA18-201ENST00000384416 132 ntBASIC0.31□□□□□ -2.36
TRAF3IP1Q8TDR0 Y_RNA.617-201ENST00000410920 90 ntBASIC0.31□□□□□ -2.36
TRAF3IP1Q8TDR0 SNORD71-201ENST00000411292 86 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 233.1 ms