Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
SHKBP1Q8TBC3 Y_RNA.98-201ENST00000363109 102 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-480P-201ENST00000384332 107 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 SNORD38.2-201ENST00000384470 69 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 SNORA2B-201ENST00000384583 137 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 MIR660-201ENST00000385235 97 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-602P-201ENST00000411155 105 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 AC087499.7-201ENST00000441958 109 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 RPL23AP6-201ENST00000446637 472 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 U7.4-201ENST00000614961 63 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 MIR6873-201ENST00000622788 63 ntBASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
SHKBP1Q8TBC3 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
SHKBP1Q8TBC3 AC099513.1-201ENST00000490423 301 ntBASIC2.39□□□□□ -2.03
SHKBP1Q8TBC3 RNU7-153P-201ENST00000516455 62 ntBASIC2.39□□□□□ -2.03
SHKBP1Q8TBC3 SNORA74.3-201ENST00000517108 154 ntBASIC2.39□□□□□ -2.03
SHKBP1Q8TBC3 RNA5SP437-201ENST00000517249 129 ntBASIC2.39□□□□□ -2.03
SHKBP1Q8TBC3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.39□□□□□ -2.03
SHKBP1Q8TBC3 AL449363.1-201ENST00000617815 186 ntBASIC2.39□□□□□ -2.03
SHKBP1Q8TBC3 RNA5SP133-201ENST00000363368 119 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-478P-201ENST00000363904 110 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 Y_RNA.545-201ENST00000384652 105 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 RNU11-3P-201ENST00000391111 133 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 Z96811.1-201ENST00000445880 108 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 RNVU1-2-201ENST00000516326 135 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 MTND5P40-201ENST00000559945 246 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 AP001362.1-201ENST00000625165 124 ntBASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SHKBP1Q8TBC3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-129P-201ENST00000391022 107 ntBASIC2.37□□□□□ -2.03
SHKBP1Q8TBC3 MIR1283-2-201ENST00000408621 87 ntBASIC2.37□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-519P-201ENST00000410590 108 ntBASIC2.37□□□□□ -2.03
SHKBP1Q8TBC3 AC004223.1-201ENST00000479840 271 ntBASIC2.37□□□□□ -2.03
SHKBP1Q8TBC3 SNORA25.13-201ENST00000516395 103 ntBASIC2.37□□□□□ -2.03
SHKBP1Q8TBC3 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
SHKBP1Q8TBC3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHKBP1Q8TBC3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 SNORD114-1-201ENST00000362705 72 ntBASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 Y_RNA.168-201ENST00000363740 102 ntBASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 MIR520A-201ENST00000384862 85 ntBASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-523P-201ENST00000516304 54 ntBASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 MIR4524B-201ENST00000581569 115 ntBASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 AP000648.3-201ENST00000623539 4507 ntBASIC2.36□□□□□ -2.03
SHKBP1Q8TBC3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 HSBP1P2-201ENST00000299671 229 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 RNY1P13-201ENST00000365030 105 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 RNU1-148P-201ENST00000384472 162 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 SNORA64-201ENST00000384674 134 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 MIR1236-201ENST00000408340 102 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-237P-201ENST00000515985 71 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 SUB1P4-201ENST00000566062 339 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 MIR4709-201ENST00000577272 72 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 MIR4446-201ENST00000578505 67 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 MIR6766-201ENST00000622641 72 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 AC008133.2-201ENST00000624540 351 ntBASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHKBP1Q8TBC3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-624P-201ENST00000363411 107 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 RNU6-296P-201ENST00000384608 107 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 AC011753.1-201ENST00000451001 220 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 SNORD4B-201ENST00000459083 72 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 AC114801.3-201ENST00000510231 177 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 RNU7-43P-201ENST00000516554 64 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 Y_RNA.788-201ENST00000622394 112 ntBASIC2.34□□□□□ -2.03
SHKBP1Q8TBC3 MIR764-201ENST00000390811 85 ntBASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 SNORA48.1-201ENST00000390879 135 ntBASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 AL450471.1-201ENST00000447509 127 ntBASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 RNA5SP137-201ENST00000516833 135 ntBASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 CYP3A52P-201ENST00000563326 91 ntBASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 MIR3126-201ENST00000577443 74 ntBASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
SHKBP1Q8TBC3 MIR424-201ENST00000362227 98 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 RNU6-1094P-201ENST00000362416 104 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 RNU6-112P-201ENST00000363599 104 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 SNORA67.3-201ENST00000384366 140 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 RNU6-1237P-201ENST00000384777 107 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 AC092427.1-202ENST00000430569 476 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 snoU13.27-201ENST00000459278 104 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 MIR548AO-201ENST00000579992 96 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 MIR4764-201ENST00000580680 88 ntBASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms