Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 AL020996.3-201ENST00000606617 222 ntBASIC1.07□□□□□ -2.24
TRIM58Q8NG06 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
TRIM58Q8NG06 MIR6717-201ENST00000622747 73 ntBASIC1.07□□□□□ -2.24
TRIM58Q8NG06 AC021613.1-201ENST00000623880 111 ntBASIC1.07□□□□□ -2.24
TRIM58Q8NG06 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
TRIM58Q8NG06 SNORD38B-202ENST00000625943 69 ntBASIC1.07□□□□□ -2.24
TRIM58Q8NG06 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 RNU6-647P-201ENST00000364243 107 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 RNU4-16P-201ENST00000364737 141 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 AC245047.7-201ENST00000440265 293 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 Y_RNA.651-201ENST00000459380 103 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
TRIM58Q8NG06 RNU6-971P-201ENST00000516920 106 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 PRELID3BP2-201ENST00000605362 201 ntBASIC1.06□□□□□ -2.24
TRIM58Q8NG06 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRIM58Q8NG06 Y_RNA.118-201ENST00000363300 101 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 HMGN1P33-201ENST00000432945 451 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 AL158147.1-201ENST00000443970 75 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 SNORA31.2-201ENST00000516019 134 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 RNU11-2P-201ENST00000516898 142 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 AC021443.1-201ENST00000604478 211 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 AL137067.1-201ENST00000615933 120 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 AC132825.6-201ENST00000638861 357 ntBASIC1.05□□□□□ -2.24
TRIM58Q8NG06 RNU6-235P-201ENST00000362644 107 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 RNU6-1190P-201ENST00000410811 104 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 AL022718.1-201ENST00000412004 84 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 snoU13.25-201ENST00000458945 104 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 snoU13.18-201ENST00000459483 104 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 MIR4305-201ENST00000583252 102 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 Z97988.1-201ENST00000637697 135 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 AL391516.1-201ENST00000554380 2449 ntBASIC1.04□□□□□ -2.24
TRIM58Q8NG06 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 Y_RNA.366-201ENST00000365540 102 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 RNU6-910P-201ENST00000390844 107 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 SNORA26.6-201ENST00000391256 115 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 RNU7-164P-201ENST00000459221 62 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 RN7SKP19-201ENST00000516016 252 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 MIR2115-201ENST00000516657 100 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 SNORA70.22-201ENST00000517160 124 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 AP000753.3-201ENST00000604083 169 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 AC108081.1-201ENST00000604358 221 ntBASIC1.03□□□□□ -2.24
TRIM58Q8NG06 SNORA22.1-201ENST00000362701 134 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 Y_RNA.191-201ENST00000363972 113 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 RNU6-81P-201ENST00000365608 104 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 Y_RNA.430-201ENST00000384081 110 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 RNU6-959P-201ENST00000384671 107 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 SNORD12-201ENST00000391002 90 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 MIR1185-1-201ENST00000408598 86 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 MIR1302-7-201ENST00000408841 72 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 RNU6-602P-201ENST00000411155 105 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 AC090844.1-201ENST00000422019 156 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.02□□□□□ -2.25
TRIM58Q8NG06 RNU6-1061P-201ENST00000516530 99 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 AP003716.2-201ENST00000528260 108 ntBASIC1.02□□□□□ -2.25
TRIM58Q8NG06 RNU6-80P-201ENST00000384195 107 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 MIR1263-201ENST00000408324 86 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 AL606753.1-201ENST00000427435 87 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 RNU6-1234P-201ENST00000516877 103 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 MIR4452-201ENST00000583004 71 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 SNORA4-201ENST00000584302 138 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 SEPT14P17-201ENST00000617978 177 ntBASIC1.01□□□□□ -2.25
TRIM58Q8NG06 Y_RNA.71-201ENST00000362892 104 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 MIR759-201ENST00000390224 91 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 RNA5SP144-201ENST00000410846 116 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 AC244023.1-201ENST00000426884 112 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 RNU7-113P-201ENST00000459273 62 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 RNU6-62P-201ENST00000516526 102 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 MIR4661-201ENST00000582720 75 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 AC242498.1-201ENST00000604134 111 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 MIR6516-201ENST00000630554 81 ntBASIC1□□□□□ -2.25
TRIM58Q8NG06 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
TRIM58Q8NG06 Y_RNA.298-201ENST00000364960 107 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 RNU6-42P-201ENST00000384165 107 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 RNU6-1117P-201ENST00000384525 104 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 RNU6-1237P-201ENST00000384777 107 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.99□□□□□ -2.25
TRIM58Q8NG06 RNA5SP102-201ENST00000516865 106 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 AC004812.1-201ENST00000540773 146 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.99□□□□□ -2.25
TRIM58Q8NG06 Y_RNA.171-201ENST00000363760 102 ntBASIC0.98□□□□□ -2.25
TRIM58Q8NG06 Y_RNA.363-201ENST00000365529 113 ntBASIC0.98□□□□□ -2.25
TRIM58Q8NG06 Y_RNA.531-201ENST00000384589 121 ntBASIC0.98□□□□□ -2.25
TRIM58Q8NG06 MIR489-201ENST00000384923 84 ntBASIC0.98□□□□□ -2.25
TRIM58Q8NG06 SNORD12C-201ENST00000386307 89 ntBASIC0.98□□□□□ -2.25
TRIM58Q8NG06 RNU6-205P-201ENST00000390858 107 ntBASIC0.98□□□□□ -2.25
TRIM58Q8NG06 RNA5SP136-201ENST00000410906 107 ntBASIC0.98□□□□□ -2.25
TRIM58Q8NG06 Y_RNA.617-201ENST00000410920 90 ntBASIC0.98□□□□□ -2.25
TRIM58Q8NG06 AL512326.2-201ENST00000426359 151 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 274.7 ms