Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 AC004965.1-201ENST00000413033 213 ntBASIC1.88□□□□□ -2.11
SHCBP1Q8NEM2 AC245517.4-201ENST00000448601 281 ntBASIC1.88□□□□□ -2.11
SHCBP1Q8NEM2 RNU7-113P-201ENST00000459273 62 ntBASIC1.88□□□□□ -2.11
SHCBP1Q8NEM2 MIR3152-201ENST00000579801 74 ntBASIC1.88□□□□□ -2.11
SHCBP1Q8NEM2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.88□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.348-201ENST00000365403 103 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-439P-201ENST00000384188 106 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 SNORA51.10-201ENST00000384418 136 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-905P-201ENST00000384434 107 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 SNORA19.1-201ENST00000410656 129 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 AL161935.2-201ENST00000414627 60 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 HMGN1P33-201ENST00000432945 451 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.694-201ENST00000516677 117 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 SNORD53B-201ENST00000577887 78 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 BX248123.2-201ENST00000606318 124 ntBASIC1.87□□□□□ -2.11
SHCBP1Q8NEM2 SNORD115-2-201ENST00000362842 82 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 SNORD115-20-201ENST00000365099 82 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.430-201ENST00000384081 110 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 MIR518E-201ENST00000385252 88 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-816P-201ENST00000390914 107 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-1268P-201ENST00000391214 107 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-1239P-201ENST00000391310 107 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-893P-201ENST00000458841 100 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 AC113410.1-201ENST00000505029 247 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 RNU7-43P-201ENST00000516554 64 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 MIR4764-201ENST00000580680 88 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 AP001318.4-201ENST00000616637 121 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 AC008133.2-201ENST00000624540 351 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 MIR1255B1-201ENST00000636325 63 ntBASIC1.86□□□□□ -2.11
SHCBP1Q8NEM2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 SNORD115-19-201ENST00000363098 82 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 SNORD115-18-201ENST00000363293 82 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-640P-201ENST00000363693 105 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 SNORD115-17-201ENST00000364612 82 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-60P-201ENST00000364792 103 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.466-201ENST00000384294 113 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-1067P-201ENST00000384752 107 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 MIR590-201ENST00000385008 97 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 RNA5SP261-201ENST00000410536 106 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 RNU4-69P-201ENST00000410677 143 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 RPL39P25-201ENST00000449384 154 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 MIR1270-201ENST00000459320 83 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 snoU13.16-201ENST00000459350 104 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 MIR5582-201ENST00000579697 68 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 MIR548AE2-201ENST00000583456 67 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 AL645939.4-201ENST00000604495 135 ntBASIC1.85□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-1113P-201ENST00000384348 107 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 MIR653-201ENST00000385279 96 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 MIR1912-201ENST00000410389 80 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-109P-201ENST00000516364 107 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 RNU6-184P-201ENST00000516514 107 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 AC141557.1-201ENST00000540982 400 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 MIR8055-201ENST00000610739 97 ntBASIC1.84□□□□□ -2.11
SHCBP1Q8NEM2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SHCBP1Q8NEM2 RNU1-42P-201ENST00000364033 160 ntBASIC1.83□□□□□ -2.12
SHCBP1Q8NEM2 MIR520C-201ENST00000385005 87 ntBASIC1.83□□□□□ -2.12
SHCBP1Q8NEM2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SHCBP1Q8NEM2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.83□□□□□ -2.12
SHCBP1Q8NEM2 JTBP1-201ENST00000441314 247 ntBASIC1.83□□□□□ -2.12
SHCBP1Q8NEM2 RNA5SP33-201ENST00000516687 98 ntBASIC1.83□□□□□ -2.12
SHCBP1Q8NEM2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.83□□□□□ -2.12
SHCBP1Q8NEM2 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
SHCBP1Q8NEM2 Y_RNA.78-201ENST00000362970 110 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 RNA5SP259-201ENST00000365541 109 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 MIR517C-201ENST00000385103 95 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 MIR513A1-201ENST00000385138 129 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 RNY4P30-201ENST00000410216 95 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 AC009474.2-201ENST00000451383 136 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 RNU6-904P-201ENST00000516206 101 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 MIR4679-1-201ENST00000637619 75 ntBASIC1.82□□□□□ -2.12
SHCBP1Q8NEM2 RNU6-363P-201ENST00000362895 105 ntBASIC1.81□□□□□ -2.12
SHCBP1Q8NEM2 SNORA1.1-201ENST00000364671 133 ntBASIC1.81□□□□□ -2.12
SHCBP1Q8NEM2 Y_RNA.544-201ENST00000384650 113 ntBASIC1.81□□□□□ -2.12
SHCBP1Q8NEM2 SNORA67.6-201ENST00000391093 99 ntBASIC1.81□□□□□ -2.12
SHCBP1Q8NEM2 RPS3AP1-201ENST00000413190 320 ntBASIC1.81□□□□□ -2.12
SHCBP1Q8NEM2 snoU13.18-201ENST00000459483 104 ntBASIC1.81□□□□□ -2.12
SHCBP1Q8NEM2 RNU7-41P-201ENST00000515917 61 ntBASIC1.81□□□□□ -2.12
SHCBP1Q8NEM2 SNORA32-201ENST00000384072 121 ntBASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 Y_RNA.507-201ENST00000384500 99 ntBASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 SNORD41-201ENST00000386967 70 ntBASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 RNU6-322P-201ENST00000516010 103 ntBASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 SNORA44.1-201ENST00000517031 108 ntBASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 MIR8065-201ENST00000620577 100 ntBASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 Z97988.1-201ENST00000637697 135 ntBASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 AP000648.3-201ENST00000623539 4507 ntBASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SHCBP1Q8NEM2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms