Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU1-133P-201ENST00000364867 167 ntBASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 Y_RNA.521-201ENST00000384560 114 ntBASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 SNORA20-201ENST00000384662 132 ntBASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 RNA5SP261-201ENST00000410536 106 ntBASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 RNA5SP127-201ENST00000411051 133 ntBASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 MIR18B-201ENST00000454574 71 ntBASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
CCDC71LQ8N9Z2 MIR411-201ENST00000362239 96 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 Y_RNA.83-201ENST00000363005 113 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 SNORA25.7-201ENST00000364375 127 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-597P-201ENST00000365620 102 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-47P-201ENST00000383866 107 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-1336P-201ENST00000383886 109 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 MIR508-201ENST00000384857 115 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-1319P-201ENST00000390855 104 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-747P-201ENST00000390928 104 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-241P-201ENST00000391148 104 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-918P-201ENST00000391219 106 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 MIR1257-201ENST00000408490 117 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNA5SP237-201ENST00000410414 113 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-177P-201ENST00000411257 104 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU7-56P-201ENST00000458744 62 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU7-185P-201ENST00000459215 60 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 RNU6-1149P-201ENST00000516810 97 ntBASIC0.47□□□□□ -2.33
CCDC71LQ8N9Z2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.75-201ENST00000362927 97 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 RNU4-16P-201ENST00000364737 141 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.466-201ENST00000384294 113 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-364P-201ENST00000384387 107 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-342P-201ENST00000384521 104 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 MIR573-201ENST00000384964 99 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 MIR624-201ENST00000385217 97 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 RPL39P25-201ENST00000449384 154 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 RNU7-156P-201ENST00000517214 74 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 AC133485.1-201ENST00000567176 124 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 AC138907.6-201ENST00000568401 126 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
CCDC71LQ8N9Z2 MTND5P32-201ENST00000560711 1802 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 MIR30D-201ENST00000362283 70 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-1020P-201ENST00000363684 107 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.489-201ENST00000384410 101 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 MIR563-201ENST00000385080 79 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 MIR125B2-201ENST00000385128 89 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 SCARNA15-202ENST00000516881 127 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 MRPS18CP4-201ENST00000535821 231 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 AC130289.1-201ENST00000577321 73 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 AC021613.1-201ENST00000623880 111 ntBASIC0.45□□□□□ -2.34
CCDC71LQ8N9Z2 MT-TF-201ENST00000387314 71 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 SNORD93-201ENST00000408813 74 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-447P-201ENST00000410293 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-1118P-201ENST00000410382 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-1076P-201ENST00000410397 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-355P-201ENST00000410427 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-791P-201ENST00000410467 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-705P-201ENST00000410601 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-1100P-201ENST00000410691 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-860P-201ENST00000410860 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-1217P-201ENST00000411276 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-785P-201ENST00000411324 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 RNU7-102P-201ENST00000458948 62 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 AC022559.1-201ENST00000520905 205 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 AC004812.1-201ENST00000540773 146 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 MIR3612-201ENST00000579753 87 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 MIR4431-201ENST00000579990 94 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 AC008608.1-201ENST00000603910 127 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 U6.90-201ENST00000614007 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 U6.70-201ENST00000620287 104 ntBASIC0.44□□□□□ -2.34
CCDC71LQ8N9Z2 SNORA22.1-201ENST00000362701 134 ntBASIC0.43□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.430-201ENST00000384081 110 ntBASIC0.43□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-768P-201ENST00000384683 107 ntBASIC0.43□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.43□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-1219P-201ENST00000516143 112 ntBASIC0.43□□□□□ -2.34
CCDC71LQ8N9Z2 AC009779.6-201ENST00000603972 165 ntBASIC0.43□□□□□ -2.34
CCDC71LQ8N9Z2 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.188-201ENST00000363952 111 ntBASIC0.42□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.42□□□□□ -2.34
CCDC71LQ8N9Z2 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-1271P-201ENST00000517049 105 ntBASIC0.42□□□□□ -2.34
CCDC71LQ8N9Z2 AL662814.1-201ENST00000617364 121 ntBASIC0.42□□□□□ -2.34
CCDC71LQ8N9Z2 MIR18A-201ENST00000362310 71 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 SNORD114-26-201ENST00000363543 72 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.233-201ENST00000364407 101 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 RNU6-1082P-201ENST00000364574 107 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.274-201ENST00000364714 101 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 Y_RNA.435-201ENST00000384095 112 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 RNU4-83P-201ENST00000410863 133 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 AC107027.2-201ENST00000512197 115 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 RNA5SP480-201ENST00000516840 109 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 MIR6513-201ENST00000621188 64 ntBASIC0.41□□□□□ -2.34
CCDC71LQ8N9Z2 MIR6841-201ENST00000637129 72 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms