Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SNORD38B-202ENST00000625943 69 ntBASIC1.36□□□□□ -2.19
CHPFQ8IZ52 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CHPFQ8IZ52 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CHPFQ8IZ52 Y_RNA.354-201ENST00000365448 111 ntBASIC1.35□□□□□ -2.19
CHPFQ8IZ52 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
CHPFQ8IZ52 SNORA26.6-201ENST00000391256 115 ntBASIC1.35□□□□□ -2.19
CHPFQ8IZ52 MIR1276-201ENST00000408707 83 ntBASIC1.35□□□□□ -2.19
CHPFQ8IZ52 RNU6-613P-201ENST00000410412 108 ntBASIC1.35□□□□□ -2.19
CHPFQ8IZ52 AC090844.1-201ENST00000422019 156 ntBASIC1.35□□□□□ -2.19
CHPFQ8IZ52 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
CHPFQ8IZ52 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.35□□□□□ -2.19
CHPFQ8IZ52 RNU6-647P-201ENST00000364243 107 ntBASIC1.34□□□□□ -2.19
CHPFQ8IZ52 Y_RNA.224-201ENST00000364308 111 ntBASIC1.34□□□□□ -2.19
CHPFQ8IZ52 RNU6-53P-201ENST00000365367 106 ntBASIC1.34□□□□□ -2.19
CHPFQ8IZ52 RNU6-971P-201ENST00000516920 106 ntBASIC1.34□□□□□ -2.19
CHPFQ8IZ52 AC021443.1-201ENST00000604478 211 ntBASIC1.34□□□□□ -2.19
CHPFQ8IZ52 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CHPFQ8IZ52 SNORA22.1-201ENST00000362701 134 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 Y_RNA.366-201ENST00000365540 102 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 Y_RNA.430-201ENST00000384081 110 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 MT-TN-201ENST00000387400 73 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 SNORD111-201ENST00000408139 94 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 RNU4-61P-201ENST00000411243 107 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 AL022718.1-201ENST00000412004 84 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 AL158147.1-201ENST00000443970 75 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 AC004223.1-201ENST00000479840 271 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 AC023827.1-201ENST00000569247 97 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 MIR4305-201ENST00000583252 102 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 AP000753.3-201ENST00000604083 169 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 AC108081.1-201ENST00000604358 221 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 MIR6504-201ENST00000613520 61 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 AL137067.1-201ENST00000615933 120 ntBASIC1.33□□□□□ -2.2
CHPFQ8IZ52 SNORD113.3-201ENST00000364630 78 ntBASIC1.32□□□□□ -2.2
CHPFQ8IZ52 SNORD114-24-201ENST00000365029 72 ntBASIC1.32□□□□□ -2.2
CHPFQ8IZ52 RNU6-602P-201ENST00000411155 105 ntBASIC1.32□□□□□ -2.2
CHPFQ8IZ52 RNA5SP102-201ENST00000516865 106 ntBASIC1.32□□□□□ -2.2
CHPFQ8IZ52 AC036111.3-201ENST00000526389 112 ntBASIC1.32□□□□□ -2.2
CHPFQ8IZ52 MIR3910-1-201ENST00000580936 111 ntBASIC1.32□□□□□ -2.2
CHPFQ8IZ52 AC106800.4-201ENST00000614905 153 ntBASIC1.32□□□□□ -2.2
CHPFQ8IZ52 AC012676.2-201ENST00000619258 186 ntBASIC1.32□□□□□ -2.2
CHPFQ8IZ52 RNU6-235P-201ENST00000362644 107 ntBASIC1.31□□□□□ -2.2
CHPFQ8IZ52 RNU6-654P-201ENST00000364373 107 ntBASIC1.31□□□□□ -2.2
CHPFQ8IZ52 RNA5SP144-201ENST00000410846 116 ntBASIC1.31□□□□□ -2.2
CHPFQ8IZ52 RNU7-164P-201ENST00000459221 62 ntBASIC1.31□□□□□ -2.2
CHPFQ8IZ52 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
CHPFQ8IZ52 POLR2J4-204ENST00000418424 324 ntBASIC1.3□□□□□ -2.2
CHPFQ8IZ52 SNORD124-201ENST00000459577 104 ntBASIC1.3□□□□□ -2.2
CHPFQ8IZ52 OR2A41P-201ENST00000473586 105 ntBASIC1.3□□□□□ -2.2
CHPFQ8IZ52 RN7SKP19-201ENST00000516016 252 ntBASIC1.3□□□□□ -2.2
CHPFQ8IZ52 MIR4264-201ENST00000583520 66 ntBASIC1.3□□□□□ -2.2
CHPFQ8IZ52 AC132825.6-201ENST00000638861 357 ntBASIC1.3□□□□□ -2.2
CHPFQ8IZ52 AL157777.2-201ENST00000258070 137 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 MIR377-201ENST00000362145 69 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 Y_RNA.116-201ENST00000363292 103 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 Y_RNA.280-201ENST00000364765 112 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 Y_RNA.508-201ENST00000384502 114 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 SNORA2B-201ENST00000384583 137 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 AC244023.1-201ENST00000426884 112 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 FABP5P4-201ENST00000437203 171 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.29□□□□□ -2.2
CHPFQ8IZ52 RNU7-113P-201ENST00000459273 62 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 AC242498.1-201ENST00000604134 111 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 MIR6841-201ENST00000637129 72 ntBASIC1.29□□□□□ -2.2
CHPFQ8IZ52 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.29□□□□□ -2.2
CHPFQ8IZ52 Y_RNA.168-201ENST00000363740 102 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 Y_RNA.191-201ENST00000363972 113 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 Y_RNA.298-201ENST00000364960 107 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 MIR518E-201ENST00000385252 88 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 RNU6-205P-201ENST00000390858 107 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 MIR942-201ENST00000401111 86 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 RNU2-35P-201ENST00000516446 142 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 RNU6-789P-201ENST00000517105 102 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.28□□□□□ -2.2
CHPFQ8IZ52 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
CHPFQ8IZ52 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.28□□□□□ -2.21
CHPFQ8IZ52 Y_RNA.118-201ENST00000363300 101 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 Y_RNA.171-201ENST00000363760 102 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 Y_RNA.355-201ENST00000365462 98 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 RNU6-81P-201ENST00000365608 104 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 RNU6-959P-201ENST00000384671 107 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 SNORD12C-201ENST00000386307 89 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 RNA5SP95-201ENST00000410319 137 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 UBL5P1-201ENST00000507979 193 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 RNU6-1061P-201ENST00000516530 99 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 IGKV1-22-201ENST00000524313 326 ntBASIC1.27□□□□□ -2.21
CHPFQ8IZ52 RNU6-80P-201ENST00000384195 107 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 MIR1263-201ENST00000408324 86 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 Y_RNA.617-201ENST00000410920 90 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 AL512326.2-201ENST00000426359 151 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 AC067940.1-201ENST00000458411 300 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 RNU7-123P-201ENST00000515911 60 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 RNY4P20-201ENST00000516678 93 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 RNU6-1234P-201ENST00000516877 103 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 AC004812.1-201ENST00000540773 146 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 MIR4452-201ENST00000583004 71 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 MIR7111-201ENST00000619751 72 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 U2.22-201ENST00000636441 106 ntBASIC1.26□□□□□ -2.21
CHPFQ8IZ52 AL391516.1-201ENST00000554380 2449 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms