Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 Y_RNA.478-201ENST00000384358 107 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU4-70P-201ENST00000384579 139 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 SNORA20-201ENST00000384662 132 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.571-201ENST00000384753 98 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-447P-201ENST00000410293 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-355P-201ENST00000410427 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-791P-201ENST00000410467 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-705P-201ENST00000410601 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-860P-201ENST00000410860 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNA5SP127-201ENST00000411051 133 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-785P-201ENST00000411324 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNU7-156P-201ENST00000517214 74 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 MIR4308-201ENST00000580634 81 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 MIR3128-201ENST00000581957 66 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 U6.90-201ENST00000614007 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 U6.70-201ENST00000620287 104 ntBASIC0.43□□□□□ -2.34
C9orf40Q8IXQ3 RNY1-201ENST00000364228 113 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 RNU4-45P-201ENST00000365469 141 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-643P-201ENST00000384018 107 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 MIR936-201ENST00000401264 98 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 RNA5SP237-201ENST00000410414 113 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 RNU7-102P-201ENST00000458948 62 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 MIR4711-201ENST00000578274 70 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 SNORD92-201ENST00000585078 85 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 AC008608.1-201ENST00000603910 127 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 AL162730.1-201ENST00000605734 292 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 U4.1-201ENST00000620349 87 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
C9orf40Q8IXQ3 RNU6-597P-201ENST00000365620 102 ntBASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 MIR489-201ENST00000384923 84 ntBASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 MIR624-201ENST00000385217 97 ntBASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 RPL39P25-201ENST00000449384 154 ntBASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 RNU4-71P-201ENST00000516258 113 ntBASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 AC090897.1-201ENST00000580909 226 ntBASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.41□□□□□ -2.34
C9orf40Q8IXQ3 Y_RNA.60-201ENST00000362831 98 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-275P-201ENST00000364910 107 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 SNORD100-201ENST00000408573 76 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 SNORD93-201ENST00000408813 74 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 MTND3P2-201ENST00000438452 342 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-1023P-201ENST00000516137 106 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.680-201ENST00000516441 93 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-1149P-201ENST00000516810 97 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 SCARNA15-202ENST00000516881 127 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 MIR4719-201ENST00000585233 84 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 AL662814.1-201ENST00000617364 121 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 AC021613.1-201ENST00000623880 111 ntBASIC0.4□□□□□ -2.35
C9orf40Q8IXQ3 SNORA22.1-201ENST00000362701 134 ntBASIC0.39□□□□□ -2.35
C9orf40Q8IXQ3 SNORA25.7-201ENST00000364375 127 ntBASIC0.39□□□□□ -2.35
C9orf40Q8IXQ3 SNORA20.1-201ENST00000364790 130 ntBASIC0.39□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-702P-201ENST00000364982 107 ntBASIC0.39□□□□□ -2.35
C9orf40Q8IXQ3 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
C9orf40Q8IXQ3 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
C9orf40Q8IXQ3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.39□□□□□ -2.35
C9orf40Q8IXQ3 MIR6841-201ENST00000637129 72 ntBASIC0.39□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.412-201ENST00000384001 104 ntBASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-196P-201ENST00000384315 107 ntBASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 AC002350.1-201ENST00000490759 375 ntBASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-111P-201ENST00000517179 105 ntBASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 MIR4503-201ENST00000582187 83 ntBASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 U6.106-201ENST00000636360 105 ntBASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.75-201ENST00000362927 97 ntBASIC0.37□□□□□ -2.35
C9orf40Q8IXQ3 RNU4-16P-201ENST00000364737 141 ntBASIC0.37□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.447-201ENST00000384184 113 ntBASIC0.37□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-679P-201ENST00000391003 106 ntBASIC0.37□□□□□ -2.35
C9orf40Q8IXQ3 RNU4-83P-201ENST00000410863 133 ntBASIC0.37□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-448P-201ENST00000517052 107 ntBASIC0.37□□□□□ -2.35
C9orf40Q8IXQ3 MIR5087-201ENST00000635826 76 ntBASIC0.37□□□□□ -2.35
C9orf40Q8IXQ3 MTND5P32-201ENST00000560711 1802 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.307-201ENST00000365022 117 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 RNA5SP117-201ENST00000365294 118 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.515-201ENST00000384535 112 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.521-201ENST00000384560 114 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-918P-201ENST00000391219 106 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-893P-201ENST00000458841 100 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 MRPS18CP4-201ENST00000535821 231 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 AC141846.1-201ENST00000568348 142 ntBASIC0.36□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.193-201ENST00000363979 102 ntBASIC0.35□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.200-201ENST00000364018 102 ntBASIC0.35□□□□□ -2.35
C9orf40Q8IXQ3 RNU6-1336P-201ENST00000383886 109 ntBASIC0.35□□□□□ -2.35
C9orf40Q8IXQ3 Y_RNA.452-201ENST00000384202 108 ntBASIC0.35□□□□□ -2.35
C9orf40Q8IXQ3 U8.15-201ENST00000390947 134 ntBASIC0.35□□□□□ -2.35
C9orf40Q8IXQ3 MIR4431-201ENST00000579990 94 ntBASIC0.35□□□□□ -2.35
C9orf40Q8IXQ3 MIR3149-201ENST00000584629 83 ntBASIC0.35□□□□□ -2.35
C9orf40Q8IXQ3 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
C9orf40Q8IXQ3 MIR8066-201ENST00000617280 78 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms