Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU6-644P-201ENST00000391155 98 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 SNORA7.5-201ENST00000410672 110 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 RNU7-193P-201ENST00000516723 65 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.77□□□□□ -2.13
VRK3Q8IV63 MIR548Z-201ENST00000584743 97 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 Z97988.1-201ENST00000637697 135 ntBASIC1.77□□□□□ -2.13
VRK3Q8IV63 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VRK3Q8IV63 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VRK3Q8IV63 RNU6-1313P-201ENST00000362622 102 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 RNU6-60P-201ENST00000364792 103 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 MIR653-201ENST00000385279 96 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 AL591806.2-201ENST00000433122 173 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 RN7SKP12-201ENST00000516275 143 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 RNU6-795P-201ENST00000516323 103 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 RNU7-43P-201ENST00000516554 64 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 MIR4419B-201ENST00000577260 68 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 FAM106DP-201ENST00000586416 501 ntBASIC1.76□□□□□ -2.13
VRK3Q8IV63 RNU6-1123P-201ENST00000362347 106 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 SNORD45B-201ENST00000364617 72 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 RNA5SP173-201ENST00000364857 136 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 SNORD115-35-201ENST00000365122 82 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 SNORA18-201ENST00000384416 132 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 AL451046.2-201ENST00000403074 277 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 AC108210.2-201ENST00000503681 201 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 RNU7-61P-201ENST00000515897 61 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 RNU6-917P-201ENST00000516294 104 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 AC015712.3-201ENST00000559380 164 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 DEFB122-202ENST00000569013 197 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 MIR8065-201ENST00000620577 100 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 AC091304.10-201ENST00000641554 121 ntBASIC1.75□□□□□ -2.13
VRK3Q8IV63 Y_RNA.95-201ENST00000363079 95 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 RNY1P10-201ENST00000363268 113 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 MIR764-201ENST00000390811 85 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 HMGN2P19-201ENST00000425149 265 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 HMGN1P33-201ENST00000432945 451 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 RNA5SP233-201ENST00000459153 113 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 SNORA31.17-201ENST00000516953 127 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 RNU7-35P-201ENST00000517174 62 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 MIR4529-201ENST00000578110 78 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 MIR4439-201ENST00000583746 80 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.74□□□□□ -2.13
VRK3Q8IV63 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VRK3Q8IV63 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
VRK3Q8IV63 SNORA16B-201ENST00000364674 135 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 RNU6-203P-201ENST00000384038 104 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 RNU6-1275P-201ENST00000391087 107 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 Y_RNA.593-201ENST00000410292 98 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 AL161935.2-201ENST00000414627 60 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 UBL5P1-201ENST00000507979 193 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 RNU6-1006P-201ENST00000516998 103 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 MIR4764-201ENST00000580680 88 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 U7.3-201ENST00000616123 62 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
VRK3Q8IV63 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
VRK3Q8IV63 Y_RNA.17-201ENST00000362433 111 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 Y_RNA.96-201ENST00000363092 109 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 SNORA1.1-201ENST00000364671 133 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 RNU6-573P-201ENST00000383938 106 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 SNORA32-201ENST00000384072 121 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 RNU6-592P-201ENST00000411333 103 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 BTF3P4-201ENST00000418852 495 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 AC108729.3-201ENST00000513484 108 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 RNU7-2P-201ENST00000516096 62 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 AP003327.1-201ENST00000529684 127 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 AC008133.2-201ENST00000624540 351 ntBASIC1.72□□□□□ -2.13
VRK3Q8IV63 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 Y_RNA.354-201ENST00000365448 111 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 RNU6-342P-201ENST00000384521 104 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 RNU6-602P-201ENST00000411155 105 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 AC004965.1-201ENST00000413033 213 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 MRPL35P3-201ENST00000421557 364 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 Y_RNA.685-201ENST00000516532 108 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 RNU2-19P-201ENST00000517288 84 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.71□□□□□ -2.14
VRK3Q8IV63 AL096840.1-201ENST00000603287 93 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 AL512310.12-203ENST00000640543 90 ntBASIC1.71□□□□□ -2.14
VRK3Q8IV63 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
VRK3Q8IV63 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 RNU6-1134P-201ENST00000365156 101 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 RNU6-972P-201ENST00000391208 107 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 AC090844.1-201ENST00000422019 156 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 AC055731.1-201ENST00000474387 401 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 Y_RNA.705-201ENST00000516862 110 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 AC022254.1-201ENST00000567857 235 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.7□□□□□ -2.14
VRK3Q8IV63 Y_RNA.140-201ENST00000363474 103 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 Y_RNA.190-201ENST00000363964 101 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 Y_RNA.247-201ENST00000364500 92 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 RNU6-675P-201ENST00000384236 104 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms