Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-307P-201ENST00000516743 106 ntBASIC-1.35□□□□□ -2.63
USP54Q70EL1 RNU6-273P-201ENST00000516937 96 ntBASIC-1.35□□□□□ -2.63
USP54Q70EL1 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.35□□□□□ -2.63
USP54Q70EL1 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.35□□□□□ -2.63
USP54Q70EL1 TPTEP1-208ENST00000636884 213 ntBASIC-1.35□□□□□ -2.63
USP54Q70EL1 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.36□□□□□ -2.63
USP54Q70EL1 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.36□□□□□ -2.63
USP54Q70EL1 RNU6-373P-201ENST00000411247 98 ntBASIC-1.36□□□□□ -2.63
USP54Q70EL1 AC093423.1-201ENST00000440817 142 ntBASIC-1.36□□□□□ -2.63
USP54Q70EL1 RNU6-86P-201ENST00000606534 107 ntBASIC-1.36□□□□□ -2.63
USP54Q70EL1 AC091932.4-201ENST00000623386 200 ntBASIC-1.36□□□□□ -2.63
USP54Q70EL1 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.37□□□□□ -2.63
USP54Q70EL1 MIR539-201ENST00000365690 78 ntBASIC-1.37□□□□□ -2.63
USP54Q70EL1 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.37□□□□□ -2.63
USP54Q70EL1 AL603914.1-201ENST00000401964 204 ntBASIC-1.37□□□□□ -2.63
USP54Q70EL1 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.37□□□□□ -2.63
USP54Q70EL1 RNU7-13P-201ENST00000516413 62 ntBASIC-1.37□□□□□ -2.63
USP54Q70EL1 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.37□□□□□ -2.63
USP54Q70EL1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.37□□□□□ -2.63
USP54Q70EL1 RNU6-502P-201ENST00000362419 108 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 RNU6-593P-201ENST00000364716 112 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 RNU2-55P-201ENST00000411146 174 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 SCARNA18B-201ENST00000458806 135 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 MTCO2P24-201ENST00000515611 426 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 AL021707.8-201ENST00000609428 183 ntBASIC-1.38□□□□□ -2.63
USP54Q70EL1 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 RNY4P27-201ENST00000363341 96 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 SNORD24-201ENST00000383884 75 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 RNU6-154P-201ENST00000384306 106 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 AC016907.1-201ENST00000419483 435 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.39□□□□□ -2.63
USP54Q70EL1 MIR5692C2-201ENST00000577959 77 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 PISRT1.1-201ENST00000616930 107 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 AL603755.1-201ENST00000619504 163 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.39□□□□□ -2.63
USP54Q70EL1 AC140658.3-201ENST00000567603 271 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 MIR4724-201ENST00000579485 89 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 AC119751.7-201ENST00000600494 245 ntBASIC-1.39□□□□□ -2.63
USP54Q70EL1 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 SNORD115-44-201ENST00000365391 82 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 AC009161.1-201ENST00000417306 376 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 HLA-S-202ENST00000425174 53 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 SNORD22.1-201ENST00000516331 125 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 RNU7-70P-201ENST00000516941 66 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 RNU6-264P-201ENST00000517134 104 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 AC011476.5-201ENST00000615594 130 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 AC013791.1-201ENST00000616619 62 ntBASIC-1.4□□□□□ -2.63
USP54Q70EL1 SNORA22.1-201ENST00000362701 134 ntBASIC-1.41□□□□□ -2.63
USP54Q70EL1 SNORD114-10-201ENST00000363409 72 ntBASIC-1.41□□□□□ -2.63
USP54Q70EL1 RNY1P2-201ENST00000364820 117 ntBASIC-1.41□□□□□ -2.63
USP54Q70EL1 SNORA75-201ENST00000384158 137 ntBASIC-1.41□□□□□ -2.63
USP54Q70EL1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.41□□□□□ -2.63
USP54Q70EL1 MIR3145-201ENST00000580727 82 ntBASIC-1.41□□□□□ -2.63
USP54Q70EL1 AC073114.1-201ENST00000612027 490 ntBASIC-1.41□□□□□ -2.63
USP54Q70EL1 MIR1246-201ENST00000636535 73 ntBASIC-1.41□□□□□ -2.63
USP54Q70EL1 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 MIR519E-201ENST00000385075 84 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 AC244090.1-201ENST00000441884 93 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 AP000533.3-201ENST00000447704 118 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNU7-169P-201ENST00000459456 61 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 MTND5P40-201ENST00000559945 246 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 AC138207.3-201ENST00000585289 166 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 MIR6854-201ENST00000614935 69 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 AC021613.1-201ENST00000623880 111 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNY3P3-201ENST00000363816 102 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNU6-308P-201ENST00000390957 107 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 AC098614.3-201ENST00000438957 440 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNU7-55P-201ENST00000459426 62 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 RNU6-397P-201ENST00000516226 104 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 MIR5688-201ENST00000580619 83 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 AC005014.3-201ENST00000605985 190 ntBASIC-1.42□□□□□ -2.64
USP54Q70EL1 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.43□□□□□ -2.64
USP54Q70EL1 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.43□□□□□ -2.64
USP54Q70EL1 AC097635.1-201ENST00000450678 155 ntBASIC-1.43□□□□□ -2.64
USP54Q70EL1 AC022137.1-201ENST00000483735 151 ntBASIC-1.43□□□□□ -2.64
USP54Q70EL1 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.44□□□□□ -2.64
USP54Q70EL1 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.44□□□□□ -2.64
USP54Q70EL1 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.44□□□□□ -2.64
USP54Q70EL1 MIR548I2-201ENST00000408348 149 ntBASIC-1.44□□□□□ -2.64
USP54Q70EL1 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.44□□□□□ -2.64
USP54Q70EL1 AC145350.1-201ENST00000567426 208 ntBASIC-1.44□□□□□ -2.64
USP54Q70EL1 MIR4460-201ENST00000577862 86 ntBASIC-1.44□□□□□ -2.64
USP54Q70EL1 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.45□□□□□ -2.64
USP54Q70EL1 MIR517B-201ENST00000385102 67 ntBASIC-1.45□□□□□ -2.64
USP54Q70EL1 RNA5SP33-201ENST00000516687 98 ntBASIC-1.45□□□□□ -2.64
USP54Q70EL1 DEFB117-201ENST00000602356 141 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms