Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 RNU7-123P-201ENST00000515911 60 ntBASIC1.11□□□□□ -2.23
TMEM88Q6PEY1 RNU6-971P-201ENST00000516920 106 ntBASIC1.11□□□□□ -2.23
TMEM88Q6PEY1 IGKV1-22-201ENST00000524313 326 ntBASIC1.11□□□□□ -2.23
TMEM88Q6PEY1 AC068338.1-201ENST00000565567 176 ntBASIC1.11□□□□□ -2.23
TMEM88Q6PEY1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.11□□□□□ -2.23
TMEM88Q6PEY1 TUG1_4.1-201ENST00000619464 181 ntBASIC1.11□□□□□ -2.23
TMEM88Q6PEY1 MIR377-201ENST00000362145 69 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 MIR378A-201ENST00000362177 66 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 Y_RNA.470-201ENST00000384307 117 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 SNORA18-201ENST00000384416 132 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 MIR613-201ENST00000385248 95 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 MIR758-201ENST00000390227 88 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 Y_RNA.586-201ENST00000391146 98 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 RNA5SP237-201ENST00000410414 113 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 RNU6-893P-201ENST00000458841 100 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 RNY4P20-201ENST00000516678 93 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 AC004812.1-201ENST00000540773 146 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 MIR4303-201ENST00000581299 66 ntBASIC1.1□□□□□ -2.23
TMEM88Q6PEY1 Y_RNA.298-201ENST00000364960 107 ntBASIC1.09□□□□□ -2.23
TMEM88Q6PEY1 RNU6-580P-201ENST00000365159 107 ntBASIC1.09□□□□□ -2.23
TMEM88Q6PEY1 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
TMEM88Q6PEY1 MIR942-201ENST00000401111 86 ntBASIC1.09□□□□□ -2.23
TMEM88Q6PEY1 RNU6-1165P-201ENST00000410119 107 ntBASIC1.09□□□□□ -2.23
TMEM88Q6PEY1 AL603825.1-201ENST00000438481 80 ntBASIC1.09□□□□□ -2.23
TMEM88Q6PEY1 RNA5SP33-201ENST00000516687 98 ntBASIC1.09□□□□□ -2.23
TMEM88Q6PEY1 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
TMEM88Q6PEY1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
TMEM88Q6PEY1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 RNU6-704P-201ENST00000364162 103 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 SNORA32-201ENST00000384072 121 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 Y_RNA.531-201ENST00000384589 121 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 MIR517C-201ENST00000385103 95 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 MIR1323-201ENST00000408090 73 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 MIR1263-201ENST00000408324 86 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 RNU4-62P-201ENST00000410125 130 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 AL158147.1-201ENST00000443970 75 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 RN7SKP19-201ENST00000516016 252 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 SNORA31.24-201ENST00000517232 57 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 AC022523.2-201ENST00000561045 150 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 AL645939.4-201ENST00000604495 135 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 AL512598.1-201ENST00000610158 273 ntBASIC1.08□□□□□ -2.24
TMEM88Q6PEY1 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 RNU6-647P-201ENST00000364243 107 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 RNU6-60P-201ENST00000364792 103 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 RNU6-934P-201ENST00000365154 107 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 RNU6-781P-201ENST00000516377 101 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 RNU1-92P-201ENST00000517017 135 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 MIR4771-2-201ENST00000577758 74 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 MIR4771-1-201ENST00000582617 74 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.07□□□□□ -2.24
TMEM88Q6PEY1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 SNORD89-201ENST00000390981 114 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 BTF3P4-201ENST00000418852 495 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 AC108729.3-201ENST00000513484 108 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 RNU6-1061P-201ENST00000516530 99 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 RNU6-1234P-201ENST00000516877 103 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 MIR548AE2-201ENST00000583456 67 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 AL662814.1-201ENST00000617364 121 ntBASIC1.06□□□□□ -2.24
TMEM88Q6PEY1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 Y_RNA.280-201ENST00000364765 112 ntBASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 RNU6-1104P-201ENST00000384723 104 ntBASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 MIR100-201ENST00000385259 80 ntBASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 AL603908.1-201ENST00000406098 201 ntBASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 AL354695.1-201ENST00000427935 228 ntBASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 AC067940.1-201ENST00000458411 300 ntBASIC1.05□□□□□ -2.24
TMEM88Q6PEY1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 AC023934.1-201ENST00000574529 2389 ntBASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 MIR30D-201ENST00000362283 70 ntBASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 Y_RNA.525-201ENST00000384570 113 ntBASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 MIR563-201ENST00000385080 79 ntBASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 RNU6-1086P-201ENST00000410930 100 ntBASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 AC141846.1-201ENST00000568348 142 ntBASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 AL589743.1-201ENST00000551932 2712 ntBASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
TMEM88Q6PEY1 ZNF209P-201ENST00000593450 2304 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 MIR1-1-201ENST00000362147 71 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 SNORD50.2-201ENST00000365465 70 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 MIR539-201ENST00000365690 78 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 AP1B1P2-201ENST00000416196 106 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 RPL39P25-201ENST00000449384 154 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 RNU7-107P-201ENST00000459121 61 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 RNU7-95P-201ENST00000459222 64 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 RNU7-79P-201ENST00000516082 62 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 snoU13.31-201ENST00000607291 104 ntBASIC1.03□□□□□ -2.24
TMEM88Q6PEY1 AL391516.1-201ENST00000554380 2449 ntBASIC1.03□□□□□ -2.25
TMEM88Q6PEY1 SNORD115-2-201ENST00000362842 82 ntBASIC1.02□□□□□ -2.25
TMEM88Q6PEY1 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
TMEM88Q6PEY1 SNORD115-20-201ENST00000365099 82 ntBASIC1.02□□□□□ -2.25
TMEM88Q6PEY1 MIR200A-201ENST00000384875 90 ntBASIC1.02□□□□□ -2.25
TMEM88Q6PEY1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.02□□□□□ -2.25
TMEM88Q6PEY1 Y_RNA.617-201ENST00000410920 90 ntBASIC1.02□□□□□ -2.25
TMEM88Q6PEY1 RPS26P5-201ENST00000418544 335 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms