Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MIR499B-201ENST00000636498 73 ntBASIC-0.05□□□□□ -2.42
H3F3CQ6NXT2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 RNU4-16P-201ENST00000364737 141 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 SNORA22B-201ENST00000383876 138 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 SNORA18-201ENST00000384416 132 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 RNU6-291P-201ENST00000384720 107 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 MIR593-201ENST00000384856 100 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 RNA5SP153-201ENST00000516498 76 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 RNU7-70P-201ENST00000516941 66 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 MIR4801-201ENST00000582704 82 ntBASIC-0.06□□□□□ -2.42
H3F3CQ6NXT2 SNORA22.1-201ENST00000362701 134 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 RNU6-127P-201ENST00000390897 107 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 RNU2-55P-201ENST00000411146 174 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 DEFB131E-201ENST00000532329 154 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 AC113195.1-201ENST00000579952 141 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 MIR5688-201ENST00000580619 83 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 AC244669.1-204ENST00000621564 178 ntBASIC-0.07□□□□□ -2.42
H3F3CQ6NXT2 UBE2WP1-201ENST00000362030 340 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 AC096949.1-201ENST00000412047 152 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 RNA5SP47-201ENST00000517230 109 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 MIR5197-201ENST00000583721 112 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 AC091304.10-201ENST00000641554 121 ntBASIC-0.08□□□□□ -2.42
H3F3CQ6NXT2 SNORA42.1-201ENST00000363515 137 ntBASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 RNA5SP245-201ENST00000364239 121 ntBASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 SNORD28-201ENST00000384706 75 ntBASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 AC022028.1-201ENST00000412054 408 ntBASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 AC113618.1-201ENST00000416747 285 ntBASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 AC021613.1-201ENST00000623880 111 ntBASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 MTND5P32-201ENST00000560711 1802 ntBASIC-0.09□□□□□ -2.42
H3F3CQ6NXT2 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 SNORA63.5-201ENST00000363548 123 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 RNU6-949P-201ENST00000384040 107 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 MIR610-201ENST00000385139 96 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 AL442663.2-201ENST00000554385 511 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 AL442067.1-201ENST00000613261 223 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.1□□□□□ -2.43
H3F3CQ6NXT2 SNORD114-16-201ENST00000363044 70 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 RNY1P13-201ENST00000365030 105 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 RNY3P5-201ENST00000384127 102 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 MIR145-201ENST00000384967 88 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 MIR616-201ENST00000385293 97 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 SNORA79-201ENST00000408376 140 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 RNU6-531P-201ENST00000516694 104 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 RNU6-765P-201ENST00000516916 99 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 AC097639.2-201ENST00000603159 172 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 MIR6828-201ENST00000636181 60 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 MIR371B-201ENST00000638082 66 ntBASIC-0.11□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 RPL39P34-201ENST00000477141 156 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 MIR4680-201ENST00000580906 66 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 AL365265.1-201ENST00000621045 234 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 AL160413.1-201ENST00000622780 310 ntBASIC-0.12□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.13□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.13□□□□□ -2.43
H3F3CQ6NXT2 RNA5SP128-201ENST00000365305 116 ntBASIC-0.13□□□□□ -2.43
H3F3CQ6NXT2 SNORA2A-201ENST00000383885 135 ntBASIC-0.13□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.13□□□□□ -2.43
H3F3CQ6NXT2 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms