Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RNU7-45P-201ENST00000459460 63 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 AC103591.3-201ENST00000608684 209 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 RNU6-20P-201ENST00000384106 107 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 RPL35AP4-201ENST00000412007 102 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 ELOCP4-201ENST00000420090 333 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 RNU7-195P-201ENST00000458793 62 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 RNU6-781P-201ENST00000516377 101 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 AL157770.1-201ENST00000623049 439 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 AC127459.3-201ENST00000624328 466 ntBASIC-1.64□□□□□ -2.67
RIF1Q5UIP0 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 SNORA63.6-201ENST00000364921 119 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 RNU6-737P-201ENST00000365370 107 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 MIR206-201ENST00000384872 86 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 AP000542.1-201ENST00000448473 371 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 SNORA25.10-201ENST00000515926 124 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 CPDP1-201ENST00000579660 283 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 SNORA40.5-201ENST00000391061 128 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 AC072039.2-201ENST00000608883 439 ntBASIC-1.65□□□□□ -2.67
RIF1Q5UIP0 RNU6-371P-201ENST00000364283 108 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 SNORD115-7-201ENST00000365306 82 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 RNU6-1005P-201ENST00000384519 107 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 MIR519A1-201ENST00000385257 85 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 SNORD73A-201ENST00000386062 65 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 RNU2-42P-201ENST00000410697 113 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 MTCO1P27-201ENST00000448269 226 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 ADI1P3-201ENST00000549509 470 ntBASIC-1.66□□□□□ -2.67
RIF1Q5UIP0 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.66□□□□□ -2.68
RIF1Q5UIP0 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-1.66□□□□□ -2.68
RIF1Q5UIP0 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 CYP3A54P-201ENST00000566950 75 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 MIR548AC-201ENST00000585049 88 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 AC174048.1-201ENST00000603389 144 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 MIR302B-201ENST00000362188 73 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 SNORD114-10-201ENST00000363409 72 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 MIR217-201ENST00000384817 110 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 AC079140.5-201ENST00000507882 310 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.67□□□□□ -2.68
RIF1Q5UIP0 SNORD114-7-201ENST00000362520 77 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 RNU6-289P-201ENST00000364093 107 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 MTCO3P42-201ENST00000509488 518 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 AC144568.1-201ENST00000520139 137 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 RNU6-696P-201ENST00000390834 107 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 SNORD70.1-201ENST00000391007 85 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 RNU6-550P-201ENST00000391057 101 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 MTND2P20-201ENST00000440805 661 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 SCOCP1-201ENST00000554676 349 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 MIR4666A-201ENST00000580160 79 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 AC026741.1-201ENST00000605892 482 ntBASIC-1.68□□□□□ -2.68
RIF1Q5UIP0 SNORD115-30-201ENST00000364117 82 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 RNU6-891P-201ENST00000384280 111 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 RNU6-601P-201ENST00000384540 107 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 RPL39P5-202ENST00000512505 151 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 RNU7-154P-201ENST00000516194 62 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 FRG2DP-202ENST00000566967 323 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 SNORD11B-201ENST00000607707 90 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 AL607023.1-201ENST00000620045 248 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 RNU6-827P-201ENST00000365553 106 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 SNORA25.14-201ENST00000516481 132 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 MIR4500-201ENST00000579472 76 ntBASIC-1.69□□□□□ -2.68
RIF1Q5UIP0 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 SNORD36A-201ENST00000362874 73 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 RNU6-495P-201ENST00000362995 107 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 MIR516A2-201ENST00000384888 90 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 MIR516A1-201ENST00000385033 90 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 MIR124-1-201ENST00000385275 85 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 RNU2-62P-201ENST00000410868 191 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 SNORD63B-201ENST00000411005 70 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 snoU13.6-201ENST00000458785 104 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 RNU6-762P-201ENST00000517107 102 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 AC104072.1-201ENST00000568817 668 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 AC007494.3-201ENST00000624660 743 ntBASIC-1.7□□□□□ -2.68
RIF1Q5UIP0 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 AC022140.2-201ENST00000623500 188 ntBASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 RNU1-115P-201ENST00000365329 160 ntBASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 RNU6-108P-201ENST00000365558 107 ntBASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 RNU7-24P-201ENST00000458867 62 ntBASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.71□□□□□ -2.68
RIF1Q5UIP0 MIR3684-201ENST00000579779 74 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms