Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 MIR1185-1-201ENST00000408598 86 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 RNU2-51P-201ENST00000410708 197 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 RNA5SP136-201ENST00000410906 107 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 Y_RNA.630-201ENST00000411370 108 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 RNU6-893P-201ENST00000458841 100 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 RNU7-164P-201ENST00000459221 62 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 SNORA31.2-201ENST00000516019 134 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 RNU6-1061P-201ENST00000516530 99 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 RNU6-1258P-201ENST00000516911 111 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 SNORA70.22-201ENST00000517160 124 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 MIR3914-2-201ENST00000637339 95 ntBASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
SNAI3Q3KNW1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 SNORA22.1-201ENST00000362701 134 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 RNU6-1154P-201ENST00000391001 104 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 MIR1263-201ENST00000408324 86 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 RNU6-602P-201ENST00000411155 105 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 AC244023.1-201ENST00000426884 112 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 AC245047.7-201ENST00000440265 293 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 AC048334.1-201ENST00000477975 159 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 RNU7-123P-201ENST00000515911 60 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 RNU6-313P-201ENST00000516317 112 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 RNY4P20-201ENST00000516678 93 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 RNU11-2P-201ENST00000516898 142 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 MIR4769-201ENST00000584126 77 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 AC242498.1-201ENST00000604134 111 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 AC025166.1-201ENST00000612411 163 ntBASIC0.97□□□□□ -2.25
SNAI3Q3KNW1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 SNORD115-2-201ENST00000362842 82 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.171-201ENST00000363760 102 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.291-201ENST00000364886 113 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 SNORD115-20-201ENST00000365099 82 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 RNU6-396P-201ENST00000365369 105 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 RNU6-1081P-201ENST00000384537 107 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 SNORD38B-201ENST00000384690 67 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 RNU6-910P-201ENST00000390844 107 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 AL022718.1-201ENST00000412004 84 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 AL512326.2-201ENST00000426359 151 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 AC004812.1-201ENST00000540773 146 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 SNORD38B-202ENST00000625943 69 ntBASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.198-201ENST00000364013 98 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.363-201ENST00000365529 113 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.528-201ENST00000384575 108 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.531-201ENST00000384589 121 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 COX6CP6-201ENST00000490840 228 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 AC113410.1-201ENST00000505029 247 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 MIR6516-201ENST00000630554 81 ntBASIC0.95□□□□□ -2.26
SNAI3Q3KNW1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 MTND5P18-201ENST00000445624 1801 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 MIR103A2-201ENST00000362154 78 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.346-201ENST00000365385 112 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.353-201ENST00000365440 108 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 MT-TI-201ENST00000387365 69 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 MIR2115-201ENST00000516657 100 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 AC022523.2-201ENST00000561045 150 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 MIR6078-201ENST00000611069 100 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 U6.95-201ENST00000636931 70 ntBASIC0.94□□□□□ -2.26
SNAI3Q3KNW1 RNU1-124P-201ENST00000363861 145 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.470-201ENST00000384307 117 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 SNORD12C-201ENST00000386307 89 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 MT-TN-201ENST00000387400 73 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 RNU6-613P-201ENST00000410412 108 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 RNU7-113P-201ENST00000459273 62 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 RPS23P4-201ENST00000487908 423 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 RNA5SP458-201ENST00000516188 119 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 MIR548AI-201ENST00000579940 88 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 AL359881.1-201ENST00000602916 267 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 SEPT14P17-201ENST00000617978 177 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
SNAI3Q3KNW1 RNU6-654P-201ENST00000364373 107 ntBASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 RNU6-580P-201ENST00000365159 107 ntBASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 RNA5SP33-201ENST00000516687 98 ntBASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 MIR4264-201ENST00000583520 66 ntBASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
SNAI3Q3KNW1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 RNU6-834P-201ENST00000362367 110 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.213-201ENST00000364178 111 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 Y_RNA.299-201ENST00000364973 94 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 RNU6-53P-201ENST00000365367 106 ntBASIC0.91□□□□□ -2.26
SNAI3Q3KNW1 SNORA75.2-201ENST00000391138 150 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms