Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC244023.1-201ENST00000426884 112 ntBASIC1.33□□□□□ -2.2
PTCHD3Q3KNS1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.33□□□□□ -2.2
PTCHD3Q3KNS1 SNORA70.22-201ENST00000517160 124 ntBASIC1.33□□□□□ -2.2
PTCHD3Q3KNS1 IGKV1-22-201ENST00000524313 326 ntBASIC1.33□□□□□ -2.2
PTCHD3Q3KNS1 AP000753.3-201ENST00000604083 169 ntBASIC1.33□□□□□ -2.2
PTCHD3Q3KNS1 AC242498.1-201ENST00000604134 111 ntBASIC1.33□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-235P-201ENST00000362644 107 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 RNY1P10-201ENST00000363268 113 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.127-201ENST00000363386 109 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 SNORD116-14-201ENST00000383894 92 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 SNORD116-17-201ENST00000383929 92 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 SNORD116-15-201ENST00000384445 92 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.531-201ENST00000384589 121 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 SNORD116-19-201ENST00000384729 92 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 MIRLET7F2-201ENST00000385277 83 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-910P-201ENST00000390844 107 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 RNA5SP247-201ENST00000411181 105 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 AC008267.6-201ENST00000441664 139 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 SNORD79.1-201ENST00000516069 84 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 RNU2-35P-201ENST00000516446 142 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-62P-201ENST00000516526 102 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.712-201ENST00000517011 92 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.32□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-580P-201ENST00000365159 107 ntBASIC1.31□□□□□ -2.2
PTCHD3Q3KNS1 RNU7-113P-201ENST00000459273 62 ntBASIC1.31□□□□□ -2.2
PTCHD3Q3KNS1 RNU7-21P-201ENST00000459430 62 ntBASIC1.31□□□□□ -2.2
PTCHD3Q3KNS1 AC113410.1-201ENST00000505029 247 ntBASIC1.31□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-659P-201ENST00000516454 104 ntBASIC1.31□□□□□ -2.2
PTCHD3Q3KNS1 AC004812.1-201ENST00000540773 146 ntBASIC1.31□□□□□ -2.2
PTCHD3Q3KNS1 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
PTCHD3Q3KNS1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.299-201ENST00000364973 94 ntBASIC1.3□□□□□ -2.2
PTCHD3Q3KNS1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.3□□□□□ -2.2
PTCHD3Q3KNS1 RNU7-123P-201ENST00000515911 60 ntBASIC1.3□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-1234P-201ENST00000516877 103 ntBASIC1.3□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-1258P-201ENST00000516911 111 ntBASIC1.3□□□□□ -2.2
PTCHD3Q3KNS1 AL157777.2-201ENST00000258070 137 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.171-201ENST00000363760 102 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 SNORD58C-201ENST00000365223 64 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.346-201ENST00000365385 112 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-22P-201ENST00000384355 107 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.563-201ENST00000384707 108 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 SNORA75.2-201ENST00000391138 150 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 SNORA75.3-201ENST00000391231 150 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 AL512326.2-201ENST00000426359 151 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 AL606753.1-201ENST00000427435 87 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 snoU13.2-201ENST00000459201 104 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 RNU7-90P-201ENST00000459216 62 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 COX6CP6-201ENST00000490840 228 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 RNY4P20-201ENST00000516678 93 ntBASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PTCHD3Q3KNS1 RNA5SP327-201ENST00000362494 101 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 SNORD113.3-201ENST00000364630 78 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-772P-201ENST00000516042 105 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-479P-201ENST00000516348 105 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-781P-201ENST00000516377 101 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 RNU6-1061P-201ENST00000516530 99 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 AC025166.1-201ENST00000612411 163 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 MIR8070-201ENST00000616510 88 ntBASIC1.28□□□□□ -2.2
PTCHD3Q3KNS1 Y_RNA.198-201ENST00000364013 98 ntBASIC1.27□□□□□ -2.21
PTCHD3Q3KNS1 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
PTCHD3Q3KNS1 SNORD12C-201ENST00000386307 89 ntBASIC1.27□□□□□ -2.21
PTCHD3Q3KNS1 RNU6-1168P-201ENST00000390831 104 ntBASIC1.27□□□□□ -2.21
PTCHD3Q3KNS1 MIR1263-201ENST00000408324 86 ntBASIC1.27□□□□□ -2.21
PTCHD3Q3KNS1 RNU7-107P-201ENST00000459121 61 ntBASIC1.27□□□□□ -2.21
PTCHD3Q3KNS1 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
PTCHD3Q3KNS1 MIR3914-2-201ENST00000637339 95 ntBASIC1.27□□□□□ -2.21
PTCHD3Q3KNS1 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 RNU6-654P-201ENST00000364373 107 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 Y_RNA.528-201ENST00000384575 108 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 MIR563-201ENST00000385080 79 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 MIR759-201ENST00000390224 91 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 RNU6-1333P-201ENST00000516162 93 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 RNA5SP33-201ENST00000516687 98 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 U6.95-201ENST00000636931 70 ntBASIC1.26□□□□□ -2.21
PTCHD3Q3KNS1 Y_RNA.213-201ENST00000364178 111 ntBASIC1.25□□□□□ -2.21
PTCHD3Q3KNS1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.25□□□□□ -2.21
PTCHD3Q3KNS1 MIR588-201ENST00000384900 83 ntBASIC1.25□□□□□ -2.21
PTCHD3Q3KNS1 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
PTCHD3Q3KNS1 RNU6-1086P-201ENST00000410930 100 ntBASIC1.25□□□□□ -2.21
PTCHD3Q3KNS1 AC036111.3-201ENST00000526389 112 ntBASIC1.25□□□□□ -2.21
PTCHD3Q3KNS1 AC106800.4-201ENST00000614905 153 ntBASIC1.25□□□□□ -2.21
PTCHD3Q3KNS1 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
PTCHD3Q3KNS1 MTND5P18-201ENST00000445624 1801 ntBASIC1.24□□□□□ -2.21
PTCHD3Q3KNS1 Y_RNA.470-201ENST00000384307 117 ntBASIC1.24□□□□□ -2.21
PTCHD3Q3KNS1 SNORA19-201ENST00000384737 128 ntBASIC1.24□□□□□ -2.21
PTCHD3Q3KNS1 RNU4-69P-201ENST00000410677 143 ntBASIC1.24□□□□□ -2.21
PTCHD3Q3KNS1 AC002429.1-201ENST00000437672 148 ntBASIC1.24□□□□□ -2.21
PTCHD3Q3KNS1 RNU7-62P-201ENST00000458856 62 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms