Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 Y_RNA.292-201ENST00000364904 97 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.562-201ENST00000384695 113 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-1319P-201ENST00000390855 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-747P-201ENST00000390928 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-241P-201ENST00000391148 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-493P-201ENST00000391321 108 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-447P-201ENST00000410293 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-355P-201ENST00000410427 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-791P-201ENST00000410467 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-705P-201ENST00000410601 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU4-43P-201ENST00000410628 137 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-1100P-201ENST00000410691 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-860P-201ENST00000410860 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-1217P-201ENST00000411276 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-785P-201ENST00000411324 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 AL442067.1-201ENST00000613261 223 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 U6.90-201ENST00000614007 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 U6.70-201ENST00000620287 104 ntBASIC0.43□□□□□ -2.34
SHROOM1Q2M3G4 MIR30D-201ENST00000362283 70 ntBASIC0.42□□□□□ -2.34
SHROOM1Q2M3G4 SNORD27-201ENST00000363981 72 ntBASIC0.42□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.477-201ENST00000384352 108 ntBASIC0.42□□□□□ -2.34
SHROOM1Q2M3G4 MIR563-201ENST00000385080 79 ntBASIC0.42□□□□□ -2.34
SHROOM1Q2M3G4 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
SHROOM1Q2M3G4 RNU2-4P-201ENST00000606190 192 ntBASIC0.42□□□□□ -2.34
SHROOM1Q2M3G4 AC091932.4-201ENST00000623386 200 ntBASIC0.42□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.65-201ENST00000362846 100 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 RNU6-923P-201ENST00000364753 107 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 SNORD58.1-201ENST00000391313 66 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 SNORD93-201ENST00000408813 74 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.618-201ENST00000410949 107 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 SNORD127-201ENST00000458892 86 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 MIR5197-201ENST00000583721 112 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.41□□□□□ -2.34
SHROOM1Q2M3G4 Y_RNA.133-201ENST00000363428 110 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-103P-201ENST00000363686 107 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-1292P-201ENST00000383856 107 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.542-201ENST00000384641 111 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-1011P-201ENST00000384668 107 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 RNA5SP237-201ENST00000410414 113 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 AL365205.2-201ENST00000594586 68 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 AC023932.2-201ENST00000603176 175 ntBASIC0.4□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.149-201ENST00000363558 117 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 RNY4P28-201ENST00000365281 93 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 RNU4-45P-201ENST00000365469 141 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 RPL39P25-201ENST00000449384 154 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 RNU7-80P-201ENST00000459562 61 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.668-201ENST00000516233 93 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 AC090897.1-201ENST00000580909 226 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 MIR4744-201ENST00000581563 82 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 AC092634.7-201ENST00000621022 103 ntBASIC0.39□□□□□ -2.35
SHROOM1Q2M3G4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-694P-201ENST00000364071 147 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 RNU4-16P-201ENST00000364737 141 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 MIR548H3-201ENST00000408771 118 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 MTND2P23-201ENST00000422990 651 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 AC002350.1-201ENST00000490759 375 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.797-201ENST00000515977 94 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 RNU7-70P-201ENST00000516941 66 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 SNORD92-201ENST00000585078 85 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 AL360085.1-201ENST00000604713 532 ntBASIC0.38□□□□□ -2.35
SHROOM1Q2M3G4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-403P-201ENST00000363163 104 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-978P-201ENST00000364371 103 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 RNA5SP517-201ENST00000364724 117 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.288-201ENST00000364854 92 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 RNA5SP117-201ENST00000365294 118 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-1336P-201ENST00000383886 109 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.430-201ENST00000384081 110 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 MIR568-201ENST00000385036 95 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 MT-TF-201ENST00000387314 71 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 RNU6-578P-201ENST00000390980 103 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 RNU4-83P-201ENST00000410863 133 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 MTCYBP9-201ENST00000431021 303 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 SNORA25.12-201ENST00000516202 82 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 MIR6718-201ENST00000616153 80 ntBASIC0.37□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.20-201ENST00000362479 113 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.454-201ENST00000384224 113 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.539-201ENST00000384635 107 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 SNORA20-201ENST00000384662 132 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 Y_RNA.556-201ENST00000384677 113 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 RNA5SP63-201ENST00000391225 112 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 SNORD100-201ENST00000408573 76 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 MTND1P19-201ENST00000511780 315 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
SHROOM1Q2M3G4 SNORD116-25-201ENST00000516517 92 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms