Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 SNORD115-39-201ENST00000363694 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 Y_RNA.170-201ENST00000363746 110 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-4-201ENST00000363810 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-16-201ENST00000363887 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-6-201ENST00000363942 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-42-201ENST00000364273 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-15-201ENST00000364809 81 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-1-201ENST00000364961 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-26-201ENST00000365067 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-10-201ENST00000365073 81 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-43-201ENST00000365503 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-36-201ENST00000365629 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU6-1189P-201ENST00000383958 107 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU6-30P-201ENST00000384561 107 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORA75.2-201ENST00000391138 150 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORA75.3-201ENST00000391231 150 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 PCNPP3-201ENST00000393579 471 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU6-394P-201ENST00000410735 107 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.72□□□□□ -2.29
PTCH1Q13635 AC107027.2-201ENST00000512197 115 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 RNU7-41P-201ENST00000515917 61 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.72□□□□□ -2.29
PTCH1Q13635 MIR5589-201ENST00000579442 60 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 SNORD115-40-201ENST00000606510 82 ntBASIC0.72□□□□□ -2.29
PTCH1Q13635 Y_RNA.150-201ENST00000363562 102 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 Y_RNA.241-201ENST00000364470 117 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 Y_RNA.270-201ENST00000364693 104 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 SNORA24-201ENST00000384096 131 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 SNORA27-201ENST00000384323 126 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 Y_RNA.521-201ENST00000384560 114 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 RNU6-768P-201ENST00000384683 107 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 MIR570-201ENST00000384917 97 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 MIR92A1-201ENST00000385233 78 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 Z95118.1-201ENST00000421372 247 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 SNORA18.4-201ENST00000516440 124 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 SNORD36C-201ENST00000516733 66 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 AP003716.2-201ENST00000528260 108 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.71□□□□□ -2.3
PTCH1Q13635 MIR4791-201ENST00000607666 84 ntBASIC0.71□□□□□ -2.3
PTCH1Q13635 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.7□□□□□ -2.3
PTCH1Q13635 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
PTCH1Q13635 Y_RNA.180-201ENST00000363867 113 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 SNORA25.7-201ENST00000364375 127 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 Y_RNA.272-201ENST00000364696 102 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 Y_RNA.440-201ENST00000384120 114 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 Y_RNA.555-201ENST00000384673 110 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 MIR624-201ENST00000385217 97 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 Y_RNA.580-201ENST00000391004 95 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 MIR3646-201ENST00000578301 84 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 MIR4723-201ENST00000585070 81 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 AC243994.1-201ENST00000618627 109 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 MIR376A2-201ENST00000636782 80 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 MIR6844-201ENST00000637122 62 ntBASIC0.7□□□□□ -2.3
PTCH1Q13635 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
PTCH1Q13635 RNU6-1082P-201ENST00000364574 107 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 Y_RNA.330-201ENST00000365230 109 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 RNU6-958P-201ENST00000516995 106 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 MIR4514-201ENST00000581410 57 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 MIR5197-201ENST00000583721 112 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 DNAJC19P2-201ENST00000593340 302 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 MTND1P7-201ENST00000632801 297 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 MIR4251-201ENST00000635819 61 ntBASIC0.69□□□□□ -2.3
PTCH1Q13635 RNA5SP264-201ENST00000363115 107 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 Y_RNA.351-201ENST00000365436 96 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 RNU6-1336P-201ENST00000383886 109 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 SNORA51.10-201ENST00000384418 136 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 RNU6-110P-201ENST00000384508 104 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 MIR1302-7-201ENST00000408841 72 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 RNU6-588P-201ENST00000410281 105 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 AL035398.1-201ENST00000430869 322 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 AL392103.1-201ENST00000447000 198 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 RNU7-73P-201ENST00000458743 63 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 RNU7-67P-201ENST00000459003 62 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 snoU13.16-201ENST00000459350 104 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 RPS29P24-201ENST00000486345 171 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 SCARNA15-202ENST00000516881 127 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 MIR3144-201ENST00000579460 79 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 MIR8055-201ENST00000610739 97 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
PTCH1Q13635 SNORD114-15-201ENST00000364687 72 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 Y_RNA.464-201ENST00000384282 110 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 SNORA75.5-201ENST00000391291 81 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 MIR548I3-201ENST00000408378 149 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 MIR1185-1-201ENST00000408598 86 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 MIR548I1-201ENST00000408810 149 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 RNU7-96P-201ENST00000459535 64 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 RNU6-998P-201ENST00000515894 101 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
PTCH1Q13635 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 RNA5SP48-201ENST00000363969 126 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 RNU6-818P-201ENST00000364837 108 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 SNORA2A-201ENST00000383885 135 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 RNU6-804P-201ENST00000384286 107 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 MT-TR-201ENST00000387439 65 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 RNU2-11P-201ENST00000459191 187 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms