Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL161722.3-201ENST00000605789 2983 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 RNA5SP205-201ENST00000364653 136 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 Y_RNA.528-201ENST00000384575 108 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 Y_RNA.531-201ENST00000384589 121 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 MT-TN-201ENST00000387400 73 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 Y_RNA.630-201ENST00000411370 108 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 AL512326.2-201ENST00000426359 151 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 AC113410.1-201ENST00000505029 247 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 RNU6-1258P-201ENST00000516911 111 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 MIR6516-201ENST00000630554 81 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 U6.95-201ENST00000636931 70 ntBASIC1.71□□□□□ -2.14
SSRP1Q08945 SNORD115-2-201ENST00000362842 82 ntBASIC1.7□□□□□ -2.14
SSRP1Q08945 SNORD115-20-201ENST00000365099 82 ntBASIC1.7□□□□□ -2.14
SSRP1Q08945 Y_RNA.563-201ENST00000384707 108 ntBASIC1.7□□□□□ -2.14
SSRP1Q08945 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
SSRP1Q08945 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SSRP1Q08945 SNORA31.24-201ENST00000517232 57 ntBASIC1.7□□□□□ -2.14
SSRP1Q08945 MIR4264-201ENST00000583520 66 ntBASIC1.7□□□□□ -2.14
SSRP1Q08945 AP000753.3-201ENST00000604083 169 ntBASIC1.7□□□□□ -2.14
SSRP1Q08945 MTND5P18-201ENST00000445624 1801 ntBASIC1.69□□□□□ -2.14
SSRP1Q08945 RNU6-613P-201ENST00000410412 108 ntBASIC1.69□□□□□ -2.14
SSRP1Q08945 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
SSRP1Q08945 AL359881.1-201ENST00000602916 267 ntBASIC1.69□□□□□ -2.14
SSRP1Q08945 Y_RNA.198-201ENST00000364013 98 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 Y_RNA.213-201ENST00000364178 111 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 MIR1287-201ENST00000408492 90 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 AP1B1P2-201ENST00000416196 106 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 AC244023.1-201ENST00000426884 112 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 AC022523.2-201ENST00000561045 150 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 MIR548AI-201ENST00000579940 88 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 MIR4303-201ENST00000581299 66 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 AC242498.1-201ENST00000604134 111 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 SEPT14P17-201ENST00000617978 177 ntBASIC1.68□□□□□ -2.14
SSRP1Q08945 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SSRP1Q08945 MIR377-201ENST00000362145 69 ntBASIC1.67□□□□□ -2.14
SSRP1Q08945 Y_RNA.291-201ENST00000364886 113 ntBASIC1.67□□□□□ -2.14
SSRP1Q08945 Y_RNA.299-201ENST00000364973 94 ntBASIC1.67□□□□□ -2.14
SSRP1Q08945 MIR759-201ENST00000390224 91 ntBASIC1.67□□□□□ -2.14
SSRP1Q08945 RNU6-910P-201ENST00000390844 107 ntBASIC1.67□□□□□ -2.14
SSRP1Q08945 Y_RNA.363-201ENST00000365529 113 ntBASIC1.66□□□□□ -2.14
SSRP1Q08945 Y_RNA.470-201ENST00000384307 117 ntBASIC1.66□□□□□ -2.14
SSRP1Q08945 RNU6-1104P-201ENST00000384723 104 ntBASIC1.66□□□□□ -2.14
SSRP1Q08945 SNORD12C-201ENST00000386307 89 ntBASIC1.66□□□□□ -2.14
SSRP1Q08945 SNORA75.2-201ENST00000391138 150 ntBASIC1.66□□□□□ -2.14
SSRP1Q08945 SNORA75.3-201ENST00000391231 150 ntBASIC1.66□□□□□ -2.14
SSRP1Q08945 RNA5SP33-201ENST00000516687 98 ntBASIC1.66□□□□□ -2.14
SSRP1Q08945 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
SSRP1Q08945 MIR337-201ENST00000362281 93 ntBASIC1.65□□□□□ -2.15
SSRP1Q08945 RNU6-654P-201ENST00000364373 107 ntBASIC1.65□□□□□ -2.15
SSRP1Q08945 SNORA80D-201ENST00000384488 135 ntBASIC1.65□□□□□ -2.15
SSRP1Q08945 AL591704.2-201ENST00000421658 181 ntBASIC1.65□□□□□ -2.15
SSRP1Q08945 RPS23P4-201ENST00000487908 423 ntBASIC1.65□□□□□ -2.15
SSRP1Q08945 SNORD33.1-201ENST00000516213 88 ntBASIC1.65□□□□□ -2.15
SSRP1Q08945 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
SSRP1Q08945 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
SSRP1Q08945 Y_RNA.330-201ENST00000365230 109 ntBASIC1.64□□□□□ -2.15
SSRP1Q08945 Y_RNA.353-201ENST00000365440 108 ntBASIC1.64□□□□□ -2.15
SSRP1Q08945 snoU13.2-201ENST00000459201 104 ntBASIC1.64□□□□□ -2.15
SSRP1Q08945 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
SSRP1Q08945 SNORA70.22-201ENST00000517160 124 ntBASIC1.64□□□□□ -2.15
SSRP1Q08945 AL670379.3-201ENST00000605040 251 ntBASIC1.64□□□□□ -2.15
SSRP1Q08945 RNU6-205P-201ENST00000390858 107 ntBASIC1.63□□□□□ -2.15
SSRP1Q08945 RNU4-69P-201ENST00000410677 143 ntBASIC1.63□□□□□ -2.15
SSRP1Q08945 RNU7-21P-201ENST00000459430 62 ntBASIC1.63□□□□□ -2.15
SSRP1Q08945 SNORD79.1-201ENST00000516069 84 ntBASIC1.63□□□□□ -2.15
SSRP1Q08945 MIR3163-201ENST00000581592 73 ntBASIC1.63□□□□□ -2.15
SSRP1Q08945 MIR548AE2-201ENST00000583456 67 ntBASIC1.63□□□□□ -2.15
SSRP1Q08945 SNORA18-201ENST00000384416 132 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 MIR588-201ENST00000384900 83 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 MIR548A3-201ENST00000385297 97 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 RNA5SP95-201ENST00000410319 137 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 MRPL35P3-201ENST00000421557 364 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 RNU7-62P-201ENST00000458856 62 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 RNA5SP61-201ENST00000516453 100 ntBASIC1.62□□□□□ -2.15
SSRP1Q08945 RNU6-834P-201ENST00000362367 110 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 RNY1P10-201ENST00000363268 113 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 Y_RNA.168-201ENST00000363740 102 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 RNU6-342P-201ENST00000384521 104 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 MT-TI-201ENST00000387365 69 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 SNORD12-201ENST00000391002 90 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 RNA5SP237-201ENST00000410414 113 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 Y_RNA.649-201ENST00000459077 103 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 AL512598.1-201ENST00000610158 273 ntBASIC1.61□□□□□ -2.15
SSRP1Q08945 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
SSRP1Q08945 RNA5SP327-201ENST00000362494 101 ntBASIC1.6□□□□□ -2.15
SSRP1Q08945 RNU6-580P-201ENST00000365159 107 ntBASIC1.6□□□□□ -2.15
SSRP1Q08945 SNORD26-201ENST00000384147 75 ntBASIC1.6□□□□□ -2.15
SSRP1Q08945 RNU7-90P-201ENST00000459216 62 ntBASIC1.6□□□□□ -2.15
SSRP1Q08945 MIR8070-201ENST00000616510 88 ntBASIC1.6□□□□□ -2.15
SSRP1Q08945 MIR6740-201ENST00000618268 113 ntBASIC1.6□□□□□ -2.15
SSRP1Q08945 RNY4P6-201ENST00000363667 96 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 SNORD113.3-201ENST00000364630 78 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 Y_RNA.273-201ENST00000364703 102 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 SNORA32-201ENST00000384072 121 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 SNORA25-201ENST00000384384 134 ntBASIC1.59□□□□□ -2.15
SSRP1Q08945 SNORA2B-201ENST00000384583 137 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms