Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNA5SP436-201ENST00000516020 115 ntBASIC0.26□□□□□ -2.37
SCN1BQ07699 RNA5SP480-201ENST00000516840 109 ntBASIC0.26□□□□□ -2.37
SCN1BQ07699 RNU7-70P-201ENST00000516941 66 ntBASIC0.26□□□□□ -2.37
SCN1BQ07699 Y_RNA.13-201ENST00000362403 112 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 Y_RNA.54-201ENST00000362766 105 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 SNORD118-201ENST00000363593 134 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 RNU6-103P-201ENST00000363686 107 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 Y_RNA.393-201ENST00000383936 102 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 MIR936-201ENST00000401264 98 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 AL121914.1-201ENST00000450188 156 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 RNU6-469P-201ENST00000516253 101 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 Y_RNA.720-201ENST00000517166 92 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 AP003327.1-201ENST00000529684 127 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 AC141846.1-201ENST00000568348 142 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.25□□□□□ -2.37
SCN1BQ07699 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.25□□□□□ -2.37
SCN1BQ07699 SNORA22.1-201ENST00000362701 134 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 RNA5SP62-201ENST00000363457 110 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 Y_RNA.466-201ENST00000384294 113 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 Y_RNA.574-201ENST00000384766 95 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 U8.15-201ENST00000390947 134 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 RNU4-43P-201ENST00000410628 137 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 AP003072.1-201ENST00000531740 145 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 AL442067.1-201ENST00000613261 223 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 PVT1_3.1-201ENST00000620853 95 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 AC021613.1-201ENST00000623880 111 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 MIR6841-201ENST00000637129 72 ntBASIC0.24□□□□□ -2.37
SCN1BQ07699 VTRNA1-3-201ENST00000365645 89 ntBASIC0.23□□□□□ -2.37
SCN1BQ07699 Y_RNA.422-201ENST00000384054 114 ntBASIC0.23□□□□□ -2.37
SCN1BQ07699 RNU6-472P-201ENST00000384299 107 ntBASIC0.23□□□□□ -2.37
SCN1BQ07699 MIR644A-201ENST00000385262 94 ntBASIC0.23□□□□□ -2.37
SCN1BQ07699 MIR4643-201ENST00000577473 78 ntBASIC0.23□□□□□ -2.37
SCN1BQ07699 MIR4711-201ENST00000578274 70 ntBASIC0.23□□□□□ -2.37
SCN1BQ07699 SNORA36.1-201ENST00000363424 132 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 Y_RNA.277-201ENST00000364754 102 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 Y_RNA.352-201ENST00000365439 102 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 SNORA72.6-201ENST00000384520 129 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 Y_RNA.518-201ENST00000384552 113 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 AL512326.2-201ENST00000426359 151 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 MIR4744-201ENST00000581563 82 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 MIR6082-201ENST00000613604 109 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 AC010487.4-201ENST00000637027 61 ntBASIC0.22□□□□□ -2.37
SCN1BQ07699 Y_RNA.76-201ENST00000362931 109 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 RNU4-16P-201ENST00000364737 141 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 RNU6-716P-201ENST00000365621 103 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 Y_RNA.588-201ENST00000391254 102 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 SNORD116-25-201ENST00000516517 92 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 MIR1273G-201ENST00000577677 100 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 MIR4431-201ENST00000579990 94 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 AC006504.6-201ENST00000590142 199 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 AC011921.3-201ENST00000605540 361 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
SCN1BQ07699 Y_RNA.11-201ENST00000362375 109 ntBASIC0.2□□□□□ -2.38
SCN1BQ07699 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
SCN1BQ07699 Y_RNA.32-201ENST00000362589 110 ntBASIC0.2□□□□□ -2.38
SCN1BQ07699 Y_RNA.292-201ENST00000364904 97 ntBASIC0.2□□□□□ -2.38
SCN1BQ07699 Y_RNA.396-201ENST00000383949 103 ntBASIC0.2□□□□□ -2.38
SCN1BQ07699 AC073261.1-201ENST00000429409 121 ntBASIC0.2□□□□□ -2.38
SCN1BQ07699 MIR4491-201ENST00000581087 68 ntBASIC0.2□□□□□ -2.38
SCN1BQ07699 AL589743.1-201ENST00000551932 2712 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 RNU6-978P-201ENST00000364371 103 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 SNORA18-201ENST00000384416 132 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 MIR548F4-201ENST00000408515 105 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 RNA5SP127-201ENST00000411051 133 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 RNY3P16-201ENST00000516338 101 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 MIR378D2-201ENST00000580636 98 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
SCN1BQ07699 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
SCN1BQ07699 RNU6-949P-201ENST00000384040 107 ntBASIC0.18□□□□□ -2.38
SCN1BQ07699 RNU6-1160P-201ENST00000384546 104 ntBASIC0.18□□□□□ -2.38
SCN1BQ07699 RNA5SP193-201ENST00000410353 107 ntBASIC0.18□□□□□ -2.38
SCN1BQ07699 AC096949.1-201ENST00000412047 152 ntBASIC0.18□□□□□ -2.38
SCN1BQ07699 RNU6-1149P-201ENST00000516810 97 ntBASIC0.18□□□□□ -2.38
SCN1BQ07699 RNU2-4P-201ENST00000606190 192 ntBASIC0.18□□□□□ -2.38
SCN1BQ07699 Y_RNA.205-201ENST00000364128 113 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 Y_RNA.308-201ENST00000365043 101 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 RNU6-815P-201ENST00000384080 113 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 MIR7-2-201ENST00000384970 110 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 RNU6-578P-201ENST00000390980 103 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 RNU6-493P-201ENST00000391321 108 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 RNU2-38P-201ENST00000410856 79 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 SNORA31.14-201ENST00000516728 116 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 RNA5SP268-201ENST00000516828 124 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 SCARNA15-202ENST00000516881 127 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 RNU6-765P-201ENST00000516916 99 ntBASIC0.17□□□□□ -2.38
SCN1BQ07699 SNORD114-26-201ENST00000363543 72 ntBASIC0.16□□□□□ -2.38
SCN1BQ07699 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
SCN1BQ07699 Y_RNA.174-201ENST00000363781 105 ntBASIC0.15□□□□□ -2.39
SCN1BQ07699 Y_RNA.326-201ENST00000365176 113 ntBASIC0.15□□□□□ -2.39
SCN1BQ07699 MIR624-201ENST00000385217 97 ntBASIC0.15□□□□□ -2.39
SCN1BQ07699 SUMO1P3-201ENST00000439961 304 ntBASIC0.15□□□□□ -2.39
SCN1BQ07699 Y_RNA.797-201ENST00000515977 94 ntBASIC0.15□□□□□ -2.39
SCN1BQ07699 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
SCN1BQ07699 RNU6-1229P-201ENST00000364295 107 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 RNY1P13-201ENST00000365030 105 ntBASIC0.14□□□□□ -2.39
SCN1BQ07699 Y_RNA.515-201ENST00000384535 112 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms