Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SNORD115-20-201ENST00000365099 82 ntBASIC1.23□□□□□ -2.21
RAE1P78406 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
RAE1P78406 AC244023.1-201ENST00000426884 112 ntBASIC1.23□□□□□ -2.21
RAE1P78406 RNU7-107P-201ENST00000459121 61 ntBASIC1.23□□□□□ -2.21
RAE1P78406 RNA5SP458-201ENST00000516188 119 ntBASIC1.23□□□□□ -2.21
RAE1P78406 RNU6-659P-201ENST00000516454 104 ntBASIC1.23□□□□□ -2.21
RAE1P78406 RNU6-1061P-201ENST00000516530 99 ntBASIC1.23□□□□□ -2.21
RAE1P78406 Y_RNA.712-201ENST00000517011 92 ntBASIC1.23□□□□□ -2.21
RAE1P78406 AC004812.1-201ENST00000540773 146 ntBASIC1.23□□□□□ -2.21
RAE1P78406 AC242498.1-201ENST00000604134 111 ntBASIC1.23□□□□□ -2.21
RAE1P78406 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
RAE1P78406 Y_RNA.140-201ENST00000363474 103 ntBASIC1.22□□□□□ -2.21
RAE1P78406 Y_RNA.330-201ENST00000365230 109 ntBASIC1.22□□□□□ -2.21
RAE1P78406 Y_RNA.531-201ENST00000384589 121 ntBASIC1.22□□□□□ -2.21
RAE1P78406 SNORA19-201ENST00000384737 128 ntBASIC1.22□□□□□ -2.21
RAE1P78406 SNORD12C-201ENST00000386307 89 ntBASIC1.22□□□□□ -2.21
RAE1P78406 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
RAE1P78406 AL512326.2-201ENST00000426359 151 ntBASIC1.22□□□□□ -2.21
RAE1P78406 snoU13.2-201ENST00000459201 104 ntBASIC1.22□□□□□ -2.21
RAE1P78406 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
RAE1P78406 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
RAE1P78406 U2.22-201ENST00000636441 106 ntBASIC1.22□□□□□ -2.21
RAE1P78406 RNU6-580P-201ENST00000365159 107 ntBASIC1.21□□□□□ -2.22
RAE1P78406 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
RAE1P78406 RNU6-205P-201ENST00000390858 107 ntBASIC1.21□□□□□ -2.22
RAE1P78406 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
RAE1P78406 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
RAE1P78406 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
RAE1P78406 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.21□□□□□ -2.22
RAE1P78406 COX6CP6-201ENST00000490840 228 ntBASIC1.21□□□□□ -2.22
RAE1P78406 RNU6-1333P-201ENST00000516162 93 ntBASIC1.21□□□□□ -2.22
RAE1P78406 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
RAE1P78406 AC025166.1-201ENST00000612411 163 ntBASIC1.21□□□□□ -2.22
RAE1P78406 MIR3914-2-201ENST00000637339 95 ntBASIC1.21□□□□□ -2.22
RAE1P78406 Y_RNA.470-201ENST00000384307 117 ntBASIC1.2□□□□□ -2.22
RAE1P78406 RNU6-22P-201ENST00000384355 107 ntBASIC1.2□□□□□ -2.22
RAE1P78406 MIR563-201ENST00000385080 79 ntBASIC1.2□□□□□ -2.22
RAE1P78406 MIR1263-201ENST00000408324 86 ntBASIC1.2□□□□□ -2.22
RAE1P78406 RNU7-62P-201ENST00000458856 62 ntBASIC1.2□□□□□ -2.22
RAE1P78406 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
RAE1P78406 RPS23P4-201ENST00000487908 423 ntBASIC1.2□□□□□ -2.22
RAE1P78406 RNU6-62P-201ENST00000516526 102 ntBASIC1.2□□□□□ -2.22
RAE1P78406 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
RAE1P78406 MIR6740-201ENST00000618268 113 ntBASIC1.2□□□□□ -2.22
RAE1P78406 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
RAE1P78406 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RAE1P78406 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RAE1P78406 Y_RNA.198-201ENST00000364013 98 ntBASIC1.19□□□□□ -2.22
RAE1P78406 Y_RNA.213-201ENST00000364178 111 ntBASIC1.19□□□□□ -2.22
RAE1P78406 Y_RNA.299-201ENST00000364973 94 ntBASIC1.19□□□□□ -2.22
RAE1P78406 Y_RNA.525-201ENST00000384570 113 ntBASIC1.19□□□□□ -2.22
RAE1P78406 MIR588-201ENST00000384900 83 ntBASIC1.19□□□□□ -2.22
RAE1P78406 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
RAE1P78406 AL606753.1-201ENST00000427435 87 ntBASIC1.19□□□□□ -2.22
RAE1P78406 RNU6-479P-201ENST00000516348 105 ntBASIC1.19□□□□□ -2.22
RAE1P78406 AC022523.2-201ENST00000561045 150 ntBASIC1.19□□□□□ -2.22
RAE1P78406 AL365222.1-201ENST00000614661 98 ntBASIC1.19□□□□□ -2.22
RAE1P78406 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
RAE1P78406 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
RAE1P78406 SNORD113.3-201ENST00000364630 78 ntBASIC1.18□□□□□ -2.22
RAE1P78406 Y_RNA.346-201ENST00000365385 112 ntBASIC1.18□□□□□ -2.22
RAE1P78406 Y_RNA.528-201ENST00000384575 108 ntBASIC1.18□□□□□ -2.22
RAE1P78406 SNORA2B-201ENST00000384583 137 ntBASIC1.18□□□□□ -2.22
RAE1P78406 RNU6-1168P-201ENST00000390831 104 ntBASIC1.18□□□□□ -2.22
RAE1P78406 RNU6-1165P-201ENST00000410119 107 ntBASIC1.18□□□□□ -2.22
RAE1P78406 AC108667.1-201ENST00000428618 249 ntBASIC1.18□□□□□ -2.22
RAE1P78406 RNA5SP33-201ENST00000516687 98 ntBASIC1.18□□□□□ -2.22
RAE1P78406 AC036111.3-201ENST00000526389 112 ntBASIC1.18□□□□□ -2.22
RAE1P78406 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
RAE1P78406 AL512598.1-201ENST00000610158 273 ntBASIC1.18□□□□□ -2.22
RAE1P78406 AC106800.4-201ENST00000614905 153 ntBASIC1.18□□□□□ -2.22
RAE1P78406 AL662814.1-201ENST00000617364 121 ntBASIC1.18□□□□□ -2.22
RAE1P78406 U6.95-201ENST00000636931 70 ntBASIC1.18□□□□□ -2.22
RAE1P78406 AC008163.1-202ENST00000636004 2889 ntBASIC1.18□□□□□ -2.22
RAE1P78406 SNORA18-201ENST00000384416 132 ntBASIC1.17□□□□□ -2.22
RAE1P78406 Y_RNA.563-201ENST00000384707 108 ntBASIC1.17□□□□□ -2.22
RAE1P78406 RNU6-1104P-201ENST00000384723 104 ntBASIC1.17□□□□□ -2.22
RAE1P78406 SNORD111-201ENST00000408139 94 ntBASIC1.17□□□□□ -2.22
RAE1P78406 Y_RNA.630-201ENST00000411370 108 ntBASIC1.17□□□□□ -2.22
RAE1P78406 MIR548AE2-201ENST00000583456 67 ntBASIC1.17□□□□□ -2.22
RAE1P78406 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RAE1P78406 MTND5P18-201ENST00000445624 1801 ntBASIC1.17□□□□□ -2.22
RAE1P78406 RNU6-342P-201ENST00000384521 104 ntBASIC1.16□□□□□ -2.22
RAE1P78406 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
RAE1P78406 MT-TF-201ENST00000387314 71 ntBASIC1.16□□□□□ -2.22
RAE1P78406 RNA5SP237-201ENST00000410414 113 ntBASIC1.16□□□□□ -2.22
RAE1P78406 RNU4-69P-201ENST00000410677 143 ntBASIC1.16□□□□□ -2.22
RAE1P78406 RNU6-1086P-201ENST00000410930 100 ntBASIC1.16□□□□□ -2.22
RAE1P78406 AC002429.1-201ENST00000437672 148 ntBASIC1.16□□□□□ -2.22
RAE1P78406 AC023827.1-201ENST00000569247 97 ntBASIC1.16□□□□□ -2.22
RAE1P78406 MIR3163-201ENST00000581592 73 ntBASIC1.16□□□□□ -2.22
RAE1P78406 AC012676.2-201ENST00000619258 186 ntBASIC1.16□□□□□ -2.22
RAE1P78406 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.22
RAE1P78406 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
RAE1P78406 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RAE1P78406 Y_RNA.261-201ENST00000364631 102 ntBASIC1.15□□□□□ -2.23
RAE1P78406 MIR759-201ENST00000390224 91 ntBASIC1.15□□□□□ -2.23
RAE1P78406 RNU2-51P-201ENST00000410708 197 ntBASIC1.15□□□□□ -2.23
RAE1P78406 RNU6-313P-201ENST00000516317 112 ntBASIC1.15□□□□□ -2.23
RAE1P78406 RNU7-35P-201ENST00000517174 62 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms