Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 uc_338.10-201ENST00000621872 182 ntBASIC-1.34□□□□□ -2.62
SKP1P63208 SNORD114-25-201ENST00000363742 72 ntBASIC-1.35□□□□□ -2.63
SKP1P63208 RNU6-449P-201ENST00000383914 107 ntBASIC-1.35□□□□□ -2.63
SKP1P63208 MIR599-201ENST00000385069 95 ntBASIC-1.35□□□□□ -2.63
SKP1P63208 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
SKP1P63208 AC099799.1-201ENST00000439809 192 ntBASIC-1.35□□□□□ -2.63
SKP1P63208 HAR1A.1-201ENST00000459583 118 ntBASIC-1.35□□□□□ -2.63
SKP1P63208 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.35□□□□□ -2.63
SKP1P63208 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.35□□□□□ -2.63
SKP1P63208 MIR5688-201ENST00000580619 83 ntBASIC-1.35□□□□□ -2.63
SKP1P63208 AC098479.1-201ENST00000609225 154 ntBASIC-1.35□□□□□ -2.63
SKP1P63208 MTND1P34-201ENST00000438556 671 ntBASIC-1.36□□□□□ -2.63
SKP1P63208 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.36□□□□□ -2.63
SKP1P63208 AC021146.6-201ENST00000514659 117 ntBASIC-1.36□□□□□ -2.63
SKP1P63208 MIR5197-201ENST00000583721 112 ntBASIC-1.36□□□□□ -2.63
SKP1P63208 RNU1-141P-201ENST00000364623 158 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 MIR9-2-201ENST00000384838 87 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 RNU2-55P-201ENST00000411146 174 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 MTND1P14-201ENST00000427400 950 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 SNORA27.4-201ENST00000516650 95 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 RNU6-175P-201ENST00000516896 107 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 RNU7-35P-201ENST00000517174 62 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
SKP1P63208 MIR3920-201ENST00000581751 86 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 SNORD113-5-201ENST00000607261 78 ntBASIC-1.37□□□□□ -2.63
SKP1P63208 SNORD114-29-201ENST00000364819 70 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 MIR526A2-201ENST00000390198 65 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 AC096644.2-201ENST00000429278 159 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 AC097635.1-201ENST00000450678 155 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 AL500527.2-201ENST00000454105 95 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 SEPT14P8-201ENST00000508026 178 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 RNU6-764P-201ENST00000516396 105 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 MIR5692C2-201ENST00000577959 77 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 AL121655.1-201ENST00000605811 308 ntBASIC-1.38□□□□□ -2.63
SKP1P63208 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.39□□□□□ -2.63
SKP1P63208 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.39□□□□□ -2.63
SKP1P63208 AL603914.1-201ENST00000401964 204 ntBASIC-1.39□□□□□ -2.63
SKP1P63208 RNA5SP153-201ENST00000516498 76 ntBASIC-1.39□□□□□ -2.63
SKP1P63208 AC097639.2-201ENST00000603159 172 ntBASIC-1.39□□□□□ -2.63
SKP1P63208 C8orf59P2-201ENST00000603441 271 ntBASIC-1.39□□□□□ -2.63
SKP1P63208 RNU6-86P-201ENST00000606534 107 ntBASIC-1.39□□□□□ -2.63
SKP1P63208 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 RNU4-36P-201ENST00000364294 144 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 MIR539-201ENST00000365690 78 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 RNU6-937P-201ENST00000384325 106 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 RNU6-901P-201ENST00000384593 106 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 RNU6-310P-201ENST00000384655 107 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 TRAJ51-201ENST00000504127 63 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.4□□□□□ -2.63
SKP1P63208 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 RNU6-890P-201ENST00000384121 107 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 RNU6-429P-201ENST00000384582 108 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 RNA5SP67-201ENST00000516422 131 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 YWHAEP2-201ENST00000580066 112 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 MIR4280-201ENST00000582178 76 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.41□□□□□ -2.64
SKP1P63208 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 RNY3P5-201ENST00000384127 102 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 SNORD56B-201ENST00000384713 71 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 SCARNA17-201ENST00000516183 144 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 RNU7-13P-201ENST00000516413 62 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 SNORD38.3-201ENST00000516599 73 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 MIR3908-201ENST00000579798 126 ntBASIC-1.42□□□□□ -2.64
SKP1P63208 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.43□□□□□ -2.64
SKP1P63208 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.43□□□□□ -2.64
SKP1P63208 RNU6-721P-201ENST00000410155 105 ntBASIC-1.43□□□□□ -2.64
SKP1P63208 MIR548AE1-201ENST00000583292 70 ntBASIC-1.43□□□□□ -2.64
SKP1P63208 uc_338.19-201ENST00000616808 99 ntBASIC-1.43□□□□□ -2.64
SKP1P63208 AC069503.3-201ENST00000618674 145 ntBASIC-1.43□□□□□ -2.64
SKP1P63208 RNU4-16P-201ENST00000364737 141 ntBASIC-1.44□□□□□ -2.64
SKP1P63208 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.44□□□□□ -2.64
SKP1P63208 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.44□□□□□ -2.64
SKP1P63208 RNU6-484P-201ENST00000384016 107 ntBASIC-1.44□□□□□ -2.64
SKP1P63208 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.44□□□□□ -2.64
SKP1P63208 AP000676.1-201ENST00000533307 52 ntBASIC-1.44□□□□□ -2.64
SKP1P63208 MIR5690-201ENST00000583739 73 ntBASIC-1.44□□□□□ -2.64
SKP1P63208 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.44□□□□□ -2.64
SKP1P63208 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.45□□□□□ -2.64
SKP1P63208 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.45□□□□□ -2.64
SKP1P63208 RNU6-154P-201ENST00000384306 106 ntBASIC-1.45□□□□□ -2.64
SKP1P63208 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.45□□□□□ -2.64
SKP1P63208 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.45□□□□□ -2.64
SKP1P63208 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.45□□□□□ -2.64
SKP1P63208 RNU7-70P-201ENST00000516941 66 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms