Protein–RNA interactions for Protein: P61568

ERVK11-1, Putative endogenous retrovirus group K member 11-1 Env polyprotein, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK11-1P61568 RNU6-1307P-201ENST00000391012 103 ntBASIC1.2□□□□□ -2.22
ERVK11-1P61568 RNU6-241P-201ENST00000391148 104 ntBASIC1.2□□□□□ -2.22
ERVK11-1P61568 RNU6-177P-201ENST00000411257 104 ntBASIC1.2□□□□□ -2.22
ERVK11-1P61568 MIR548AE2-201ENST00000583456 67 ntBASIC1.2□□□□□ -2.22
ERVK11-1P61568 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.2□□□□□ -2.22
ERVK11-1P61568 AC008133.2-201ENST00000624540 351 ntBASIC1.2□□□□□ -2.22
ERVK11-1P61568 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
ERVK11-1P61568 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ERVK11-1P61568 MIR302B-201ENST00000362188 73 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 SNORA22.1-201ENST00000362701 134 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 SNORA1.1-201ENST00000364671 133 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 Y_RNA.454-201ENST00000384224 113 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 MIR548D2-201ENST00000384955 97 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 AC009474.2-201ENST00000451383 136 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 RNU7-73P-201ENST00000458743 63 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 RPL39P34-201ENST00000477141 156 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 RPS23P4-201ENST00000487908 423 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 AC113410.1-201ENST00000505029 247 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 RNU6-109P-201ENST00000516364 107 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 RNU6-184P-201ENST00000516514 107 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 RNU7-6P-201ENST00000516845 62 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 AC019176.1-201ENST00000518519 225 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 AP000942.3-201ENST00000603702 160 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
ERVK11-1P61568 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
ERVK11-1P61568 SNORA25.3-201ENST00000363205 127 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 Y_RNA.140-201ENST00000363474 103 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 RNU6-1014P-201ENST00000383940 103 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 SNORA32-201ENST00000384072 121 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 MIR520C-201ENST00000385005 87 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 AC027119.1-201ENST00000440877 241 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 RNU6-168P-201ENST00000516189 101 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 RNA5SP61-201ENST00000516453 100 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 RNU6-537P-201ENST00000517277 103 ntBASIC1.18□□□□□ -2.22
ERVK11-1P61568 Y_RNA.163-201ENST00000363702 113 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 SNORA1.2-201ENST00000365189 134 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 Y_RNA.328-201ENST00000365208 113 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 RNU6-616P-201ENST00000384353 107 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 Y_RNA.537-201ENST00000384626 109 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 RNU6-602P-201ENST00000411155 105 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 RPS27P16-201ENST00000425758 201 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 RNU7-113P-201ENST00000459273 62 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 AC079140.2-201ENST00000506193 142 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 MIR4679-2-201ENST00000578358 77 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 MIR4303-201ENST00000581299 66 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 MIR4769-201ENST00000584126 77 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 uc_338.6-201ENST00000613544 171 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.17□□□□□ -2.22
ERVK11-1P61568 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ERVK11-1P61568 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.16□□□□□ -2.22
ERVK11-1P61568 RNU6-640P-201ENST00000363693 105 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 Y_RNA.213-201ENST00000364178 111 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 Y_RNA.323-201ENST00000365157 109 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 RNU6-905P-201ENST00000384434 107 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 Y_RNA.495-201ENST00000384435 112 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 MIR590-201ENST00000385008 97 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 MIR605-201ENST00000385078 83 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 RNU6-482P-201ENST00000391068 107 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 AL022718.1-201ENST00000412004 84 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 AC244023.1-201ENST00000426884 112 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 SNORD111.1-201ENST00000516421 86 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 AC068339.1-201ENST00000526965 141 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 MIR5009-201ENST00000578736 100 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 AC242498.1-201ENST00000604134 111 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 PRELID3BP2-201ENST00000605362 201 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 RNU6-94P-201ENST00000607728 107 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 MIR7974-201ENST00000615835 79 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 Z97988.1-201ENST00000637697 135 ntBASIC1.16□□□□□ -2.22
ERVK11-1P61568 SNORD115-2-201ENST00000362842 82 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 RNY4P6-201ENST00000363667 96 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 SNORD115-20-201ENST00000365099 82 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 Y_RNA.348-201ENST00000365403 103 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 SNORA17.3-201ENST00000391159 129 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 AC107297.1-201ENST00000459991 176 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 RNU7-43P-201ENST00000516554 64 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 RNA5SP33-201ENST00000516687 98 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 RNU7-53P-201ENST00000516705 60 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 RNU6-165P-201ENST00000517170 99 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 MIR548Z-201ENST00000584743 97 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 MIR4251-201ENST00000635819 61 ntBASIC1.15□□□□□ -2.23
ERVK11-1P61568 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ERVK11-1P61568 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
ERVK11-1P61568 RNU6-756P-201ENST00000383997 107 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 Y_RNA.430-201ENST00000384081 110 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 RNU6-679P-201ENST00000391003 106 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 RNU4-69P-201ENST00000410677 143 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 AL031737.1-201ENST00000450125 223 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 snoU13.16-201ENST00000459350 104 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 MIR3937-201ENST00000580135 106 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 MIR3163-201ENST00000581592 73 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 AL589743.1-201ENST00000551932 2712 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 ZNF209P-201ENST00000593450 2304 ntBASIC1.14□□□□□ -2.23
ERVK11-1P61568 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.13□□□□□ -2.23
ERVK11-1P61568 SNORD115-19-201ENST00000363098 82 ntBASIC1.13□□□□□ -2.23
ERVK11-1P61568 SNORD115-18-201ENST00000363293 82 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms