Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AC024909.2-201ENST00000553035 286 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 MTND5P40-201ENST00000559945 246 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 YWHAEP2-201ENST00000580066 112 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 MIR3688-2-201ENST00000636963 87 ntBASIC-1.11□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.12□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.12□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.12□□□□□ -2.59
HIST1H2BDP58876 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.12□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.12□□□□□ -2.59
HIST1H2BDP58876 RNA5SP330-201ENST00000517096 96 ntBASIC-1.12□□□□□ -2.59
HIST1H2BDP58876 AL359881.1-201ENST00000602916 267 ntBASIC-1.12□□□□□ -2.59
HIST1H2BDP58876 AC006006.1-201ENST00000603082 144 ntBASIC-1.12□□□□□ -2.59
HIST1H2BDP58876 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.13□□□□□ -2.59
HIST1H2BDP58876 AC093423.1-201ENST00000440817 142 ntBASIC-1.13□□□□□ -2.59
HIST1H2BDP58876 MTND1P29-201ENST00000448112 647 ntBASIC-1.13□□□□□ -2.59
HIST1H2BDP58876 MIR548AE1-201ENST00000583292 70 ntBASIC-1.13□□□□□ -2.59
HIST1H2BDP58876 MIR6715A-201ENST00000615929 79 ntBASIC-1.13□□□□□ -2.59
HIST1H2BDP58876 SNORD114-10-201ENST00000363409 72 ntBASIC-1.14□□□□□ -2.59
HIST1H2BDP58876 SNORA32-201ENST00000384072 121 ntBASIC-1.14□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.14□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.14□□□□□ -2.59
HIST1H2BDP58876 AC011712.1-201ENST00000588959 234 ntBASIC-1.14□□□□□ -2.59
HIST1H2BDP58876 AC103591.3-201ENST00000608684 209 ntBASIC-1.14□□□□□ -2.59
HIST1H2BDP58876 AC133104.2-201ENST00000615272 193 ntBASIC-1.14□□□□□ -2.59
HIST1H2BDP58876 SNORD113-8-201ENST00000363497 74 ntBASIC-1.15□□□□□ -2.59
HIST1H2BDP58876 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.15□□□□□ -2.59
HIST1H2BDP58876 RNU6-900P-201ENST00000384498 102 ntBASIC-1.15□□□□□ -2.59
HIST1H2BDP58876 SNORD56B-201ENST00000384713 71 ntBASIC-1.15□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.15□□□□□ -2.59
HIST1H2BDP58876 RNA5SP33-201ENST00000516687 98 ntBASIC-1.15□□□□□ -2.59
HIST1H2BDP58876 MIR4280-201ENST00000582178 76 ntBASIC-1.15□□□□□ -2.59
HIST1H2BDP58876 AC104984.5-201ENST00000586878 94 ntBASIC-1.15□□□□□ -2.59
HIST1H2BDP58876 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.185-201ENST00000363894 100 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 RNU6-154P-201ENST00000384306 106 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 SNORD116-1-201ENST00000384335 95 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 SNORA8.3-201ENST00000384679 139 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 MIR519E-201ENST00000385075 84 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 RNU6-735P-201ENST00000410612 107 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 RNA5SP127-201ENST00000411051 133 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 RNU6-130P-201ENST00000411112 103 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 HSPE1P25-201ENST00000455484 251 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 RNU7-113P-201ENST00000459273 62 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 RNU6-358P-201ENST00000516564 75 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 MIR548AG2-201ENST00000581228 64 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 AP001180.6-201ENST00000584918 159 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.16□□□□□ -2.6
HIST1H2BDP58876 MIR101-1-201ENST00000362265 75 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 RNY3P5-201ENST00000384127 102 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 RNU6-102P-201ENST00000384485 104 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 RNU6-901P-201ENST00000384593 106 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 MIR519A1-201ENST00000385257 85 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 RNU7-195P-201ENST00000458793 62 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 RNU6-881P-201ENST00000516813 102 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 MIR4500-201ENST00000579472 76 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 AC006504.6-201ENST00000590142 199 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 PART1_1.1-201ENST00000611761 217 ntBASIC-1.17□□□□□ -2.6
HIST1H2BDP58876 SNORD115-2-201ENST00000362842 82 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 SNORD115-20-201ENST00000365099 82 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 MT-TT-201ENST00000387460 66 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 RNA5SP144-201ENST00000410846 116 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 SNORA40.14-201ENST00000516543 86 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 SCARNA15-202ENST00000516881 127 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 SNORD116.3-201ENST00000517176 78 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 AP000676.1-201ENST00000533307 52 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 AL365205.2-201ENST00000594586 68 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 AL008718.3-201ENST00000610217 321 ntBASIC-1.18□□□□□ -2.6
HIST1H2BDP58876 RNU6-524P-201ENST00000384270 107 ntBASIC-1.19□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.19□□□□□ -2.6
HIST1H2BDP58876 MIR617-201ENST00000385030 97 ntBASIC-1.19□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.19□□□□□ -2.6
HIST1H2BDP58876 AL731563.1-201ENST00000442202 214 ntBASIC-1.19□□□□□ -2.6
HIST1H2BDP58876 SNORD38.3-201ENST00000516599 73 ntBASIC-1.19□□□□□ -2.6
HIST1H2BDP58876 MIR6851-201ENST00000617060 67 ntBASIC-1.19□□□□□ -2.6
HIST1H2BDP58876 snoU18.1-201ENST00000629629 71 ntBASIC-1.19□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 RNU6-662P-201ENST00000384253 104 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 MIR548I2-201ENST00000408348 149 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 RNU6-237P-201ENST00000515985 71 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 MIR4460-201ENST00000577862 86 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 RNU6-86P-201ENST00000606534 107 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 AL138825.1-201ENST00000618587 192 ntBASIC-1.2□□□□□ -2.6
HIST1H2BDP58876 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.21□□□□□ -2.6
HIST1H2BDP58876 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 295.7 ms