Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-755P-201ENST00000364400 103 ntBASIC1.54□□□□□ -2.16
CLRN1P58418 SNORA18-201ENST00000384416 132 ntBASIC1.54□□□□□ -2.16
CLRN1P58418 MIR934-201ENST00000401241 83 ntBASIC1.54□□□□□ -2.16
CLRN1P58418 AC245517.4-201ENST00000448601 281 ntBASIC1.54□□□□□ -2.16
CLRN1P58418 RNU6-548P-201ENST00000517083 115 ntBASIC1.54□□□□□ -2.16
CLRN1P58418 MIR103A2-201ENST00000362154 78 ntBASIC1.53□□□□□ -2.16
CLRN1P58418 RNA5SP264-201ENST00000363115 107 ntBASIC1.53□□□□□ -2.16
CLRN1P58418 RNU6-396P-201ENST00000365369 105 ntBASIC1.53□□□□□ -2.16
CLRN1P58418 MIR1185-1-201ENST00000408598 86 ntBASIC1.53□□□□□ -2.16
CLRN1P58418 snoU13.23-201ENST00000458863 104 ntBASIC1.53□□□□□ -2.16
CLRN1P58418 Y_RNA.773-201ENST00000607168 90 ntBASIC1.53□□□□□ -2.16
CLRN1P58418 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.53□□□□□ -2.16
CLRN1P58418 SNORD115-19-201ENST00000363098 82 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 SNORD115-18-201ENST00000363293 82 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 RNU6-153P-201ENST00000364422 104 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 SNORD115-17-201ENST00000364612 82 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 RNU6-1237P-201ENST00000384777 107 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 SNORD77B-201ENST00000391112 67 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 RPL39P34-201ENST00000477141 156 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 RNU6-237P-201ENST00000515985 71 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 MIR3122-201ENST00000577243 73 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 uc_338.28-201ENST00000612082 187 ntBASIC1.52□□□□□ -2.17
CLRN1P58418 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.52□□□□□ -2.17
CLRN1P58418 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLRN1P58418 Y_RNA.49-201ENST00000362714 112 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 Y_RNA.116-201ENST00000363292 103 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 U8.6-201ENST00000364939 135 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 RNU6-616P-201ENST00000384353 107 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 U8.13-201ENST00000390842 128 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.51□□□□□ -2.17
CLRN1P58418 RN7SKP88-201ENST00000516847 250 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 RNU6-295P-201ENST00000516901 104 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 AC068339.1-201ENST00000526965 141 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 7SK.8-201ENST00000612110 250 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 7SK.11-201ENST00000615477 250 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 7SK.13-201ENST00000622040 250 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 MIR6516-201ENST00000630554 81 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 MIR1255B1-201ENST00000636325 63 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 AL162726.3-218ENST00000636401 95 ntBASIC1.51□□□□□ -2.17
CLRN1P58418 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLRN1P58418 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
CLRN1P58418 RNU6-1014P-201ENST00000383940 103 ntBASIC1.5□□□□□ -2.17
CLRN1P58418 RNU6-106P-201ENST00000384405 107 ntBASIC1.5□□□□□ -2.17
CLRN1P58418 AL591806.2-201ENST00000433122 173 ntBASIC1.5□□□□□ -2.17
CLRN1P58418 RNU7-35P-201ENST00000517174 62 ntBASIC1.5□□□□□ -2.17
CLRN1P58418 MIR8081-201ENST00000611533 95 ntBASIC1.5□□□□□ -2.17
CLRN1P58418 MIR6845-201ENST00000613182 61 ntBASIC1.5□□□□□ -2.17
CLRN1P58418 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLRN1P58418 SNORD48-201ENST00000364953 64 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 Y_RNA.309-201ENST00000365046 111 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RNU6-205P-201ENST00000390858 107 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RNU6-816P-201ENST00000390914 107 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RNU6-482P-201ENST00000391068 107 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RNU6-1268P-201ENST00000391214 107 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RNU6-1239P-201ENST00000391310 107 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RNA5SP237-201ENST00000410414 113 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RPL39P25-201ENST00000449384 154 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 AC048334.1-201ENST00000477975 159 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 MIR2115-201ENST00000516657 100 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RNU11-2P-201ENST00000516898 142 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 AC015712.3-201ENST00000559380 164 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 MIR5009-201ENST00000578736 100 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 AP000753.3-201ENST00000604083 169 ntBASIC1.49□□□□□ -2.17
CLRN1P58418 RNU6-654P-201ENST00000364373 107 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 Y_RNA.323-201ENST00000365157 109 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 MIR588-201ENST00000384900 83 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 MIR1289-2-201ENST00000408360 111 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 RNU6-554P-201ENST00000410466 106 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 RNU6-1086P-201ENST00000410930 100 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 RNU6-1054P-201ENST00000411293 104 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 snoU13.2-201ENST00000459201 104 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 RNU7-79P-201ENST00000516082 62 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.48□□□□□ -2.17
CLRN1P58418 FAM71BP1-201ENST00000604431 523 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 RNU6-94P-201ENST00000607728 107 ntBASIC1.48□□□□□ -2.17
CLRN1P58418 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLRN1P58418 Y_RNA.163-201ENST00000363702 113 ntBASIC1.47□□□□□ -2.17
CLRN1P58418 RNU6-147P-201ENST00000383983 107 ntBASIC1.47□□□□□ -2.17
CLRN1P58418 RNA5SP95-201ENST00000410319 137 ntBASIC1.47□□□□□ -2.17
CLRN1P58418 MIR1912-201ENST00000410389 80 ntBASIC1.47□□□□□ -2.17
CLRN1P58418 SNORA31.2-201ENST00000516019 134 ntBASIC1.47□□□□□ -2.17
CLRN1P58418 MIR4769-201ENST00000584126 77 ntBASIC1.47□□□□□ -2.17
CLRN1P58418 MIR6740-201ENST00000618268 113 ntBASIC1.47□□□□□ -2.17
CLRN1P58418 AL353997.5-201ENST00000618886 171 ntBASIC1.47□□□□□ -2.17
CLRN1P58418 MIR450A1-201ENST00000362262 91 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 RNA5SP432-201ENST00000362480 116 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 RNU6-363P-201ENST00000362895 105 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 RNU4-67P-201ENST00000364569 141 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 Y_RNA.507-201ENST00000384500 99 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 MT-TN-201ENST00000387400 73 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 SNORA26.9-201ENST00000391322 122 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 RNU6-613P-201ENST00000410412 108 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.46□□□□□ -2.18
CLRN1P58418 AC141846.1-201ENST00000568348 142 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
CLRN1P58418 AL662814.1-201ENST00000617364 121 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms