Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MIR4771-2-201ENST00000577758 74 ntBASIC0.61□□□□□ -2.31
PEX3P56589 MIR4431-201ENST00000579990 94 ntBASIC0.61□□□□□ -2.31
PEX3P56589 MIR4771-1-201ENST00000582617 74 ntBASIC0.61□□□□□ -2.31
PEX3P56589 MIR4676-201ENST00000583078 72 ntBASIC0.61□□□□□ -2.31
PEX3P56589 MIR342-201ENST00000362212 99 ntBASIC0.6□□□□□ -2.31
PEX3P56589 Y_RNA.508-201ENST00000384502 114 ntBASIC0.6□□□□□ -2.31
PEX3P56589 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
PEX3P56589 SEPT7P4-201ENST00000437076 306 ntBASIC0.6□□□□□ -2.31
PEX3P56589 RNU6-1149P-201ENST00000516810 97 ntBASIC0.6□□□□□ -2.31
PEX3P56589 MT-TF-201ENST00000387314 71 ntBASIC0.59□□□□□ -2.31
PEX3P56589 RNU7-56P-201ENST00000458744 62 ntBASIC0.59□□□□□ -2.31
PEX3P56589 RNU6-1219P-201ENST00000516143 112 ntBASIC0.59□□□□□ -2.31
PEX3P56589 RNA5SP236-201ENST00000516169 116 ntBASIC0.59□□□□□ -2.31
PEX3P56589 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.59□□□□□ -2.31
PEX3P56589 AC021613.1-201ENST00000623880 111 ntBASIC0.59□□□□□ -2.31
PEX3P56589 AL596211.1-201ENST00000569873 2277 ntBASIC0.58□□□□□ -2.32
PEX3P56589 RNU6-1020P-201ENST00000363684 107 ntBASIC0.58□□□□□ -2.32
PEX3P56589 RNU6-379P-201ENST00000363813 104 ntBASIC0.58□□□□□ -2.32
PEX3P56589 Y_RNA.233-201ENST00000364407 101 ntBASIC0.58□□□□□ -2.32
PEX3P56589 RNU6-1336P-201ENST00000383886 109 ntBASIC0.58□□□□□ -2.32
PEX3P56589 Y_RNA.489-201ENST00000384410 101 ntBASIC0.58□□□□□ -2.32
PEX3P56589 RNU6-768P-201ENST00000384683 107 ntBASIC0.58□□□□□ -2.32
PEX3P56589 RNA5SP261-201ENST00000410536 106 ntBASIC0.58□□□□□ -2.32
PEX3P56589 AC141273.2-201ENST00000618989 130 ntBASIC0.58□□□□□ -2.32
PEX3P56589 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
PEX3P56589 MTND5P32-201ENST00000560711 1802 ntBASIC0.57□□□□□ -2.32
PEX3P56589 MIR302B-201ENST00000362188 73 ntBASIC0.57□□□□□ -2.32
PEX3P56589 RNA5SP347-201ENST00000362445 119 ntBASIC0.57□□□□□ -2.32
PEX3P56589 Y_RNA.52-201ENST00000362760 96 ntBASIC0.57□□□□□ -2.32
PEX3P56589 SNORA25.7-201ENST00000364375 127 ntBASIC0.57□□□□□ -2.32
PEX3P56589 RNU6-312P-201ENST00000364629 107 ntBASIC0.57□□□□□ -2.32
PEX3P56589 Y_RNA.393-201ENST00000383936 102 ntBASIC0.57□□□□□ -2.32
PEX3P56589 MIR520F-201ENST00000384824 87 ntBASIC0.57□□□□□ -2.32
PEX3P56589 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
PEX3P56589 AC096949.1-201ENST00000412047 152 ntBASIC0.57□□□□□ -2.32
PEX3P56589 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
PEX3P56589 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.57□□□□□ -2.32
PEX3P56589 RNU7-185P-201ENST00000459215 60 ntBASIC0.57□□□□□ -2.32
PEX3P56589 snoU13.18-201ENST00000459483 104 ntBASIC0.57□□□□□ -2.32
PEX3P56589 RNU6-977P-201ENST00000516411 103 ntBASIC0.57□□□□□ -2.32
PEX3P56589 AC022559.1-201ENST00000520905 205 ntBASIC0.57□□□□□ -2.32
PEX3P56589 AC011195.1-201ENST00000578177 177 ntBASIC0.57□□□□□ -2.32
PEX3P56589 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.57□□□□□ -2.32
PEX3P56589 AL662814.1-201ENST00000617364 121 ntBASIC0.57□□□□□ -2.32
PEX3P56589 MIR6515-201ENST00000619843 57 ntBASIC0.57□□□□□ -2.32
PEX3P56589 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
PEX3P56589 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
PEX3P56589 RNU6-1082P-201ENST00000364574 107 ntBASIC0.56□□□□□ -2.32
PEX3P56589 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
PEX3P56589 MIR125B2-201ENST00000385128 89 ntBASIC0.56□□□□□ -2.32
PEX3P56589 RNU5E-9P-201ENST00000411164 104 ntBASIC0.56□□□□□ -2.32
PEX3P56589 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
PEX3P56589 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
PEX3P56589 SNORD92-201ENST00000585078 85 ntBASIC0.56□□□□□ -2.32
PEX3P56589 SNORA22.1-201ENST00000362701 134 ntBASIC0.55□□□□□ -2.32
PEX3P56589 Y_RNA.188-201ENST00000363952 111 ntBASIC0.55□□□□□ -2.32
PEX3P56589 Y_RNA.401-201ENST00000383965 117 ntBASIC0.55□□□□□ -2.32
PEX3P56589 snosnR66.1-201ENST00000391095 99 ntBASIC0.55□□□□□ -2.32
PEX3P56589 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.55□□□□□ -2.32
PEX3P56589 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
PEX3P56589 RNU6-1258P-201ENST00000516911 111 ntBASIC0.55□□□□□ -2.32
PEX3P56589 AC008608.1-201ENST00000603910 127 ntBASIC0.55□□□□□ -2.32
PEX3P56589 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
PEX3P56589 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
PEX3P56589 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
PEX3P56589 RNU6-349P-201ENST00000362402 107 ntBASIC0.54□□□□□ -2.32
PEX3P56589 Y_RNA.297-201ENST00000364950 91 ntBASIC0.54□□□□□ -2.32
PEX3P56589 RNY1P8-201ENST00000383970 114 ntBASIC0.54□□□□□ -2.32
PEX3P56589 MIR938-201ENST00000401216 83 ntBASIC0.54□□□□□ -2.32
PEX3P56589 MIR1257-201ENST00000408490 117 ntBASIC0.54□□□□□ -2.32
PEX3P56589 Y_RNA.644-201ENST00000459006 113 ntBASIC0.54□□□□□ -2.32
PEX3P56589 AC107027.2-201ENST00000512197 115 ntBASIC0.54□□□□□ -2.32
PEX3P56589 Y_RNA.674-201ENST00000516362 113 ntBASIC0.54□□□□□ -2.32
PEX3P56589 RNU7-121P-201ENST00000516604 62 ntBASIC0.54□□□□□ -2.32
PEX3P56589 RNU6-1271P-201ENST00000517049 105 ntBASIC0.54□□□□□ -2.32
PEX3P56589 RNU2-60P-201ENST00000517290 128 ntBASIC0.54□□□□□ -2.32
PEX3P56589 MIR3152-201ENST00000579801 74 ntBASIC0.54□□□□□ -2.32
PEX3P56589 AC090897.1-201ENST00000580909 226 ntBASIC0.54□□□□□ -2.32
PEX3P56589 AC072026.1-201ENST00000605023 201 ntBASIC0.54□□□□□ -2.32
PEX3P56589 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.54□□□□□ -2.32
PEX3P56589 AC078938.1-201ENST00000620993 318 ntBASIC0.54□□□□□ -2.32
PEX3P56589 Y_RNA.240-201ENST00000364469 95 ntBASIC0.53□□□□□ -2.32
PEX3P56589 SNORD100-201ENST00000408573 76 ntBASIC0.53□□□□□ -2.32
PEX3P56589 Y_RNA.757-201ENST00000578934 114 ntBASIC0.53□□□□□ -2.32
PEX3P56589 MIR8066-201ENST00000617280 78 ntBASIC0.53□□□□□ -2.32
PEX3P56589 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
PEX3P56589 MIR18A-201ENST00000362310 71 ntBASIC0.52□□□□□ -2.33
PEX3P56589 Y_RNA.42-201ENST00000362660 108 ntBASIC0.52□□□□□ -2.33
PEX3P56589 RNU4-84P-201ENST00000364200 139 ntBASIC0.52□□□□□ -2.33
PEX3P56589 RNU4-16P-201ENST00000364737 141 ntBASIC0.52□□□□□ -2.33
PEX3P56589 RNU6-200P-201ENST00000364743 107 ntBASIC0.52□□□□□ -2.33
PEX3P56589 RNY1P6-201ENST00000384193 109 ntBASIC0.52□□□□□ -2.33
PEX3P56589 SNORA75.5-201ENST00000391291 81 ntBASIC0.52□□□□□ -2.33
PEX3P56589 RNA5SP144-201ENST00000410846 116 ntBASIC0.52□□□□□ -2.33
PEX3P56589 RNU7-102P-201ENST00000458948 62 ntBASIC0.52□□□□□ -2.33
PEX3P56589 RNU6-138P-201ENST00000515952 107 ntBASIC0.52□□□□□ -2.33
PEX3P56589 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.52□□□□□ -2.33
PEX3P56589 AC141846.1-201ENST00000568348 142 ntBASIC0.52□□□□□ -2.33
PEX3P56589 MIR3612-201ENST00000579753 87 ntBASIC0.52□□□□□ -2.33
PEX3P56589 Y_RNA.118-201ENST00000363300 101 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 252.2 ms