Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 SNORD67.1-201ENST00000516618 108 ntBASIC-0.82□□□□□ -2.54
FOXA3P55318 RNU7-70P-201ENST00000516941 66 ntBASIC-0.82□□□□□ -2.54
FOXA3P55318 MTND5P40-201ENST00000559945 246 ntBASIC-0.82□□□□□ -2.54
FOXA3P55318 MIR5692C2-201ENST00000577959 77 ntBASIC-0.82□□□□□ -2.54
FOXA3P55318 MIR4500-201ENST00000579472 76 ntBASIC-0.82□□□□□ -2.54
FOXA3P55318 MIR3129-201ENST00000581095 76 ntBASIC-0.82□□□□□ -2.54
FOXA3P55318 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 SNORA53-201ENST00000391141 249 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 RNU6-721P-201ENST00000410155 105 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 RNU4-63P-201ENST00000411313 118 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 Z95118.1-201ENST00000421372 247 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 MTND1P1-201ENST00000445453 368 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 snoU13.13-201ENST00000458842 104 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 RNU7-137P-201ENST00000516788 62 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 AC024909.2-201ENST00000553035 286 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 MIR5197-201ENST00000583721 112 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 AC006504.6-201ENST00000590142 199 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 AL359881.1-201ENST00000602916 267 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 MIR6851-201ENST00000617060 67 ntBASIC-0.83□□□□□ -2.54
FOXA3P55318 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 RNY1P7-201ENST00000384743 110 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 MIR519E-201ENST00000385075 84 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 RNU7-195P-201ENST00000458793 62 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 RNU6-507P-201ENST00000516045 100 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 SNORA27.4-201ENST00000516650 95 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 RNA5SP33-201ENST00000516687 98 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 MIR4460-201ENST00000577862 86 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 MIR548AG2-201ENST00000581228 64 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 AC098479.1-201ENST00000609225 154 ntBASIC-0.84□□□□□ -2.54
FOXA3P55318 MTND5P18-201ENST00000445624 1801 ntBASIC-0.85□□□□□ -2.54
FOXA3P55318 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 SNORD63-201ENST00000384262 68 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 RNU6-524P-201ENST00000384270 107 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 RNU6-510P-201ENST00000391239 108 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 RNU4-14P-201ENST00000410858 122 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 MTND1P34-201ENST00000438556 671 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 AC093423.1-201ENST00000440817 142 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 RNU6-893P-201ENST00000458841 100 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 AC040926.1-201ENST00000530195 238 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 MIR3179-1-201ENST00000578940 84 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 MIR3179-2-201ENST00000579107 84 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 MIR3179-3-201ENST00000579566 84 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 MIR3179-4-201ENST00000617599 84 ntBASIC-0.85□□□□□ -2.55
FOXA3P55318 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.85□□□□□ -2.55
FOXA3P55318 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 RNU4-36P-201ENST00000364294 144 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 RNA5SP368-201ENST00000364298 116 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 RNU6-484P-201ENST00000384016 107 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 RNU6-890P-201ENST00000384121 107 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 RNU6-310P-201ENST00000384655 107 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 MTND3P8-201ENST00000412909 339 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 AC016907.1-201ENST00000419483 435 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.86□□□□□ -2.55
FOXA3P55318 PMCHL1-202ENST00000423102 261 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 AC098614.3-201ENST00000438957 440 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 RNU7-113P-201ENST00000459273 62 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 SEPT14P8-201ENST00000508026 178 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 AP001328.1-201ENST00000528550 176 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 VN1R91P-201ENST00000594377 169 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 AC007485.1-201ENST00000616755 206 ntBASIC-0.86□□□□□ -2.55
FOXA3P55318 MIR20A-201ENST00000362279 71 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 SNORD115-44-201ENST00000365391 82 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 MIR518B-201ENST00000385127 83 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
FOXA3P55318 SNRPGP8-201ENST00000454064 226 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.87□□□□□ -2.55
FOXA3P55318 RNU6-506P-201ENST00000516553 94 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 AC006006.1-201ENST00000603082 144 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 C8orf59P2-201ENST00000603441 271 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 SNORD113-5-201ENST00000607261 78 ntBASIC-0.87□□□□□ -2.55
FOXA3P55318 SNORD114-10-201ENST00000363409 72 ntBASIC-0.88□□□□□ -2.55
FOXA3P55318 RNY4P14-201ENST00000363656 96 ntBASIC-0.88□□□□□ -2.55
FOXA3P55318 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.88□□□□□ -2.55
FOXA3P55318 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.88□□□□□ -2.55
FOXA3P55318 MIR617-201ENST00000385030 97 ntBASIC-0.88□□□□□ -2.55
FOXA3P55318 MIR517B-201ENST00000385102 67 ntBASIC-0.88□□□□□ -2.55
FOXA3P55318 MIR526A2-201ENST00000390198 65 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms