Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
CDH11P55287 Y_RNA.398-201ENST00000383952 99 ntBASIC0.87□□□□□ -2.27
CDH11P55287 RNY1P6-201ENST00000384193 109 ntBASIC0.87□□□□□ -2.27
CDH11P55287 MIR520E-201ENST00000384867 87 ntBASIC0.87□□□□□ -2.27
CDH11P55287 SNORD12C-201ENST00000386307 89 ntBASIC0.87□□□□□ -2.27
CDH11P55287 MIR548I1-201ENST00000408810 149 ntBASIC0.87□□□□□ -2.27
CDH11P55287 RNA5SP261-201ENST00000410536 106 ntBASIC0.87□□□□□ -2.27
CDH11P55287 RPS29P1-201ENST00000465274 159 ntBASIC0.87□□□□□ -2.27
CDH11P55287 RNU6-1258P-201ENST00000516911 111 ntBASIC0.87□□□□□ -2.27
CDH11P55287 AC112693.2-201ENST00000556538 232 ntBASIC0.87□□□□□ -2.27
CDH11P55287 MIR6767-201ENST00000637302 66 ntBASIC0.87□□□□□ -2.27
CDH11P55287 RNU6-508P-201ENST00000363231 103 ntBASIC0.86□□□□□ -2.27
CDH11P55287 RNU6-151P-201ENST00000364158 107 ntBASIC0.86□□□□□ -2.27
CDH11P55287 RNU4-11P-201ENST00000365287 132 ntBASIC0.86□□□□□ -2.27
CDH11P55287 RNU6-449P-201ENST00000383914 107 ntBASIC0.86□□□□□ -2.27
CDH11P55287 Y_RNA.464-201ENST00000384282 110 ntBASIC0.86□□□□□ -2.27
CDH11P55287 POLR2J4-204ENST00000418424 324 ntBASIC0.86□□□□□ -2.27
CDH11P55287 Y_RNA.651-201ENST00000459380 103 ntBASIC0.86□□□□□ -2.27
CDH11P55287 UBL5P1-201ENST00000507979 193 ntBASIC0.86□□□□□ -2.27
CDH11P55287 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
CDH11P55287 RNU7-70P-201ENST00000516941 66 ntBASIC0.86□□□□□ -2.27
CDH11P55287 MTND5P41-201ENST00000517498 206 ntBASIC0.86□□□□□ -2.27
CDH11P55287 MIR3668-201ENST00000582138 75 ntBASIC0.86□□□□□ -2.27
CDH11P55287 SNORA4-201ENST00000584302 138 ntBASIC0.86□□□□□ -2.27
CDH11P55287 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.86□□□□□ -2.27
CDH11P55287 Y_RNA.120-201ENST00000363304 110 ntBASIC0.85□□□□□ -2.27
CDH11P55287 SNORD116-18-201ENST00000383961 92 ntBASIC0.85□□□□□ -2.27
CDH11P55287 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
CDH11P55287 SNORD37.2-201ENST00000391075 66 ntBASIC0.85□□□□□ -2.27
CDH11P55287 FABP5P4-201ENST00000437203 171 ntBASIC0.85□□□□□ -2.27
CDH11P55287 RNU7-62P-201ENST00000458856 62 ntBASIC0.85□□□□□ -2.27
CDH11P55287 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
CDH11P55287 Y_RNA.686-201ENST00000516548 134 ntBASIC0.85□□□□□ -2.27
CDH11P55287 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.85□□□□□ -2.27
CDH11P55287 Y_RNA.757-201ENST00000578934 114 ntBASIC0.85□□□□□ -2.27
CDH11P55287 MIR3152-201ENST00000579801 74 ntBASIC0.85□□□□□ -2.27
CDH11P55287 AC011603.4-201ENST00000611325 277 ntBASIC0.85□□□□□ -2.27
CDH11P55287 MIR7111-201ENST00000619751 72 ntBASIC0.85□□□□□ -2.27
CDH11P55287 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.85□□□□□ -2.27
CDH11P55287 AC021753.1-201ENST00000635724 168 ntBASIC0.85□□□□□ -2.27
CDH11P55287 MIR30D-201ENST00000362283 70 ntBASIC0.84□□□□□ -2.27
CDH11P55287 SNORA22.1-201ENST00000362701 134 ntBASIC0.84□□□□□ -2.27
CDH11P55287 Y_RNA.354-201ENST00000365448 111 ntBASIC0.84□□□□□ -2.27
CDH11P55287 MIR588-201ENST00000384900 83 ntBASIC0.84□□□□□ -2.27
CDH11P55287 Y_RNA.584-201ENST00000391090 114 ntBASIC0.84□□□□□ -2.27
CDH11P55287 MIR942-201ENST00000401111 86 ntBASIC0.84□□□□□ -2.27
CDH11P55287 AL603914.1-201ENST00000401964 204 ntBASIC0.84□□□□□ -2.27
CDH11P55287 MIR1827-201ENST00000408549 66 ntBASIC0.84□□□□□ -2.27
CDH11P55287 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
CDH11P55287 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
CDH11P55287 Y_RNA.170-201ENST00000363746 110 ntBASIC0.83□□□□□ -2.28
CDH11P55287 RNU6-309P-201ENST00000364573 106 ntBASIC0.83□□□□□ -2.28
CDH11P55287 RNU4-16P-201ENST00000364737 141 ntBASIC0.83□□□□□ -2.28
CDH11P55287 RNA5SP144-201ENST00000410846 116 ntBASIC0.83□□□□□ -2.28
CDH11P55287 U7.7-201ENST00000459276 60 ntBASIC0.83□□□□□ -2.28
CDH11P55287 RNU6-1110P-201ENST00000516462 101 ntBASIC0.83□□□□□ -2.28
CDH11P55287 RMST_2.1-201ENST00000617263 136 ntBASIC0.83□□□□□ -2.28
CDH11P55287 Y_RNA.8-201ENST00000362353 102 ntBASIC0.82□□□□□ -2.28
CDH11P55287 RNU6-1335P-201ENST00000365426 107 ntBASIC0.82□□□□□ -2.28
CDH11P55287 Y_RNA.400-201ENST00000383963 111 ntBASIC0.82□□□□□ -2.28
CDH11P55287 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
CDH11P55287 MT-TR-201ENST00000387439 65 ntBASIC0.82□□□□□ -2.28
CDH11P55287 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.82□□□□□ -2.28
CDH11P55287 RNU6-1165P-201ENST00000410119 107 ntBASIC0.82□□□□□ -2.28
CDH11P55287 SNORD83.1-201ENST00000411362 77 ntBASIC0.82□□□□□ -2.28
CDH11P55287 RPS26P5-201ENST00000418544 335 ntBASIC0.82□□□□□ -2.28
CDH11P55287 MTATP6P21-201ENST00000440681 189 ntBASIC0.82□□□□□ -2.28
CDH11P55287 MIR18B-201ENST00000454574 71 ntBASIC0.82□□□□□ -2.28
CDH11P55287 PDCD5P2-201ENST00000507570 312 ntBASIC0.82□□□□□ -2.28
CDH11P55287 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
CDH11P55287 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.82□□□□□ -2.28
CDH11P55287 MIR6788-201ENST00000618842 66 ntBASIC0.82□□□□□ -2.28
CDH11P55287 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
CDH11P55287 RNU6-934P-201ENST00000365154 107 ntBASIC0.81□□□□□ -2.28
CDH11P55287 SNORA20-201ENST00000384662 132 ntBASIC0.81□□□□□ -2.28
CDH11P55287 RNU6-255P-201ENST00000516957 105 ntBASIC0.81□□□□□ -2.28
CDH11P55287 MIR548X2-201ENST00000579776 100 ntBASIC0.81□□□□□ -2.28
CDH11P55287 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
CDH11P55287 AL662814.1-201ENST00000617364 121 ntBASIC0.81□□□□□ -2.28
CDH11P55287 AC010332.2-201ENST00000613083 1904 ntBASIC0.81□□□□□ -2.28
CDH11P55287 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CDH11P55287 SNORD115-2-201ENST00000362842 82 ntBASIC0.8□□□□□ -2.28
CDH11P55287 Y_RNA.171-201ENST00000363760 102 ntBASIC0.8□□□□□ -2.28
CDH11P55287 Y_RNA.215-201ENST00000364204 112 ntBASIC0.8□□□□□ -2.28
CDH11P55287 SNORD115-20-201ENST00000365099 82 ntBASIC0.8□□□□□ -2.28
CDH11P55287 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
CDH11P55287 MIR569-201ENST00000385228 96 ntBASIC0.8□□□□□ -2.28
CDH11P55287 RNU6-460P-201ENST00000391158 108 ntBASIC0.8□□□□□ -2.28
CDH11P55287 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.8□□□□□ -2.28
CDH11P55287 MIR548J-201ENST00000408833 112 ntBASIC0.8□□□□□ -2.28
CDH11P55287 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
CDH11P55287 RNU7-200P-201ENST00000516105 62 ntBASIC0.8□□□□□ -2.28
CDH11P55287 RNU2-35P-201ENST00000516446 142 ntBASIC0.8□□□□□ -2.28
CDH11P55287 MIR3121-201ENST00000579680 77 ntBASIC0.8□□□□□ -2.28
CDH11P55287 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
CDH11P55287 AC020891.4-201ENST00000605745 93 ntBASIC0.8□□□□□ -2.28
CDH11P55287 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
CDH11P55287 Y_RNA.470-201ENST00000384307 117 ntBASIC0.79□□□□□ -2.28
CDH11P55287 Y_RNA.506-201ENST00000384494 102 ntBASIC0.79□□□□□ -2.28
CDH11P55287 MIR489-201ENST00000384923 84 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms