Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNA5SP261-201ENST00000410536 106 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 RNU6-177P-201ENST00000411257 104 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 RPS3AP1-201ENST00000413190 320 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 MIR3152-201ENST00000579801 74 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 MIR4264-201ENST00000583520 66 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 AC022709.1-201ENST00000615967 87 ntBASIC1.05□□□□□ -2.24
NR1H2P55055 Y_RNA.180-201ENST00000363867 113 ntBASIC1.04□□□□□ -2.24
NR1H2P55055 RNU4-16P-201ENST00000364737 141 ntBASIC1.04□□□□□ -2.24
NR1H2P55055 Y_RNA.398-201ENST00000383952 99 ntBASIC1.04□□□□□ -2.24
NR1H2P55055 SNORA20-201ENST00000384662 132 ntBASIC1.04□□□□□ -2.24
NR1H2P55055 RNA5SP236-201ENST00000516169 116 ntBASIC1.04□□□□□ -2.24
NR1H2P55055 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
NR1H2P55055 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
NR1H2P55055 AC021613.1-201ENST00000623880 111 ntBASIC1.04□□□□□ -2.24
NR1H2P55055 Y_RNA.168-201ENST00000363740 102 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 RNU1-36P-201ENST00000365130 165 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 SNORD18B-201ENST00000365659 72 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 MTATP6P21-201ENST00000440681 189 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 RNU6-94P-201ENST00000607728 107 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 AC021753.1-201ENST00000635724 168 ntBASIC1.03□□□□□ -2.24
NR1H2P55055 MIR377-201ENST00000362145 69 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 Y_RNA.251-201ENST00000364551 99 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 Y_RNA.354-201ENST00000365448 111 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 RNY1P6-201ENST00000384193 109 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 SNORD12C-201ENST00000386307 89 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
NR1H2P55055 RNU2-60P-201ENST00000517290 128 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 MTND5P41-201ENST00000517498 206 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 MIR6767-201ENST00000637302 66 ntBASIC1.02□□□□□ -2.25
NR1H2P55055 RNU6-580P-201ENST00000365159 107 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 Y_RNA.430-201ENST00000384081 110 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 Y_RNA.540-201ENST00000384638 111 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 MIR513C-201ENST00000401352 84 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 RNU6-994P-201ENST00000410507 111 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 RNU7-62P-201ENST00000458856 62 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
NR1H2P55055 RNA5SP325-201ENST00000363756 130 ntBASIC1□□□□□ -2.25
NR1H2P55055 Y_RNA.464-201ENST00000384282 110 ntBASIC1□□□□□ -2.25
NR1H2P55055 MIR588-201ENST00000384900 83 ntBASIC1□□□□□ -2.25
NR1H2P55055 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1□□□□□ -2.25
NR1H2P55055 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
NR1H2P55055 RNU6-1110P-201ENST00000516462 101 ntBASIC1□□□□□ -2.25
NR1H2P55055 Y_RNA.686-201ENST00000516548 134 ntBASIC1□□□□□ -2.25
NR1H2P55055 MIR151B-201ENST00000584249 96 ntBASIC1□□□□□ -2.25
NR1H2P55055 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1□□□□□ -2.25
NR1H2P55055 MIR6740-201ENST00000618268 113 ntBASIC1□□□□□ -2.25
NR1H2P55055 RNU6-349P-201ENST00000362402 107 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 SNORA22.1-201ENST00000362701 134 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 RNU6-508P-201ENST00000363231 103 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 Y_RNA.120-201ENST00000363304 110 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 Y_RNA.400-201ENST00000383963 111 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 RNU6-209P-201ENST00000384118 107 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 MT-TR-201ENST00000387439 65 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 RNU6-460P-201ENST00000391158 108 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 RNU7-197P-201ENST00000458836 62 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 snoU13.2-201ENST00000459201 104 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 snoU13.21-201ENST00000459368 105 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 SNORA25.12-201ENST00000516202 82 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 Y_RNA.690-201ENST00000516603 95 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 RNU6-1223P-201ENST00000517124 104 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 MIR548X2-201ENST00000579776 100 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 MIR6779-201ENST00000617283 64 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 MIR6788-201ENST00000618842 66 ntBASIC0.99□□□□□ -2.25
NR1H2P55055 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.98□□□□□ -2.25
NR1H2P55055 RNU6-309P-201ENST00000364573 106 ntBASIC0.98□□□□□ -2.25
NR1H2P55055 RNU6-690P-201ENST00000365242 106 ntBASIC0.98□□□□□ -2.25
NR1H2P55055 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.98□□□□□ -2.25
NR1H2P55055 MIR6841-201ENST00000637129 72 ntBASIC0.98□□□□□ -2.25
NR1H2P55055 Y_RNA.170-201ENST00000363746 110 ntBASIC0.97□□□□□ -2.25
NR1H2P55055 Y_RNA.215-201ENST00000364204 112 ntBASIC0.97□□□□□ -2.25
NR1H2P55055 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.97□□□□□ -2.25
NR1H2P55055 SNORD83.1-201ENST00000411362 77 ntBASIC0.97□□□□□ -2.25
NR1H2P55055 RNU5E-3P-201ENST00000515913 68 ntBASIC0.97□□□□□ -2.25
NR1H2P55055 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
NR1H2P55055 AC011603.4-201ENST00000611325 277 ntBASIC0.97□□□□□ -2.25
NR1H2P55055 uc_338.6-201ENST00000613544 171 ntBASIC0.97□□□□□ -2.25
NR1H2P55055 AC010332.2-201ENST00000613083 1904 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 RNU6-934P-201ENST00000365154 107 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 RNU6-1237P-201ENST00000384777 107 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 MIR598-201ENST00000384868 97 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 AL603914.1-201ENST00000401964 204 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 MIR548I1-201ENST00000408810 149 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 RNU6-1165P-201ENST00000410119 107 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 RNU6-893P-201ENST00000458841 100 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 Y_RNA.651-201ENST00000459380 103 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 RNU6-240P-201ENST00000516098 97 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 RNU6-255P-201ENST00000516957 105 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 RNU6-1212P-201ENST00000517023 104 ntBASIC0.96□□□□□ -2.26
NR1H2P55055 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
NR1H2P55055 Y_RNA.36-201ENST00000362602 112 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
NR1H2P55055 SNORD89-201ENST00000390981 114 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms