Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR378D2-201ENST00000580636 98 ntBASIC0.62□□□□□ -2.31
LIMK1P53667 MIR4804-201ENST00000581683 73 ntBASIC0.62□□□□□ -2.31
LIMK1P53667 AC020891.4-201ENST00000605745 93 ntBASIC0.62□□□□□ -2.31
LIMK1P53667 MIR6717-201ENST00000622747 73 ntBASIC0.62□□□□□ -2.31
LIMK1P53667 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
LIMK1P53667 Y_RNA.133-201ENST00000363428 110 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 Y_RNA.182-201ENST00000363880 111 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 RNY4P28-201ENST00000365281 93 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 Y_RNA.350-201ENST00000365409 98 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 RNU6-1292P-201ENST00000383856 107 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 SNORA20-201ENST00000384662 132 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 MIR1257-201ENST00000408490 117 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 RNA5SP237-201ENST00000410414 113 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 MTND1P19-201ENST00000511780 315 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 SCARNA15.1-201ENST00000516384 125 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 MIR5197-201ENST00000583721 112 ntBASIC0.61□□□□□ -2.31
LIMK1P53667 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
LIMK1P53667 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-369P-201ENST00000362515 102 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 Y_RNA.478-201ENST00000384358 107 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU4-70P-201ENST00000384579 139 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 Y_RNA.562-201ENST00000384695 113 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 MIR573-201ENST00000384964 99 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 MIR568-201ENST00000385036 95 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-1319P-201ENST00000390855 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-747P-201ENST00000390928 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-241P-201ENST00000391148 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-447P-201ENST00000410293 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-1118P-201ENST00000410382 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-1076P-201ENST00000410397 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-355P-201ENST00000410427 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-791P-201ENST00000410467 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-705P-201ENST00000410601 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU4-43P-201ENST00000410628 137 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-1100P-201ENST00000410691 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-860P-201ENST00000410860 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-177P-201ENST00000411257 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-1217P-201ENST00000411276 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RNU6-785P-201ENST00000411324 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 AC011921.3-201ENST00000605540 361 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 AC062037.2-201ENST00000610137 73 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 uc_338.6-201ENST00000613544 171 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 U6.90-201ENST00000614007 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 U6.70-201ENST00000620287 104 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 AC091932.4-201ENST00000623386 200 ntBASIC0.6□□□□□ -2.31
LIMK1P53667 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
LIMK1P53667 Y_RNA.626-201ENST00000411288 95 ntBASIC0.59□□□□□ -2.31
LIMK1P53667 RNU7-185P-201ENST00000459215 60 ntBASIC0.59□□□□□ -2.31
LIMK1P53667 AL365205.2-201ENST00000594586 68 ntBASIC0.59□□□□□ -2.31
LIMK1P53667 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
LIMK1P53667 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
LIMK1P53667 U4.1-201ENST00000620349 87 ntBASIC0.59□□□□□ -2.31
LIMK1P53667 MIR376A2-201ENST00000636782 80 ntBASIC0.59□□□□□ -2.31
LIMK1P53667 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
LIMK1P53667 SNORA20.1-201ENST00000364790 130 ntBASIC0.58□□□□□ -2.32
LIMK1P53667 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
LIMK1P53667 RNU7-56P-201ENST00000458744 62 ntBASIC0.58□□□□□ -2.32
LIMK1P53667 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
LIMK1P53667 MIR3128-201ENST00000581957 66 ntBASIC0.58□□□□□ -2.32
LIMK1P53667 AL162730.1-201ENST00000605734 292 ntBASIC0.58□□□□□ -2.32
LIMK1P53667 AC243829.6-201ENST00000612652 106 ntBASIC0.58□□□□□ -2.32
LIMK1P53667 Y_RNA.20-201ENST00000362479 113 ntBASIC0.57□□□□□ -2.32
LIMK1P53667 Y_RNA.121-201ENST00000363309 113 ntBASIC0.57□□□□□ -2.32
LIMK1P53667 VTRNA1-3-201ENST00000365645 89 ntBASIC0.57□□□□□ -2.32
LIMK1P53667 Y_RNA.571-201ENST00000384753 98 ntBASIC0.57□□□□□ -2.32
LIMK1P53667 MIR125B2-201ENST00000385128 89 ntBASIC0.57□□□□□ -2.32
LIMK1P53667 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
LIMK1P53667 Y_RNA.521-201ENST00000384560 114 ntBASIC0.56□□□□□ -2.32
LIMK1P53667 Y_RNA.539-201ENST00000384635 107 ntBASIC0.56□□□□□ -2.32
LIMK1P53667 SNORD93-201ENST00000408813 74 ntBASIC0.56□□□□□ -2.32
LIMK1P53667 Y_RNA.668-201ENST00000516233 93 ntBASIC0.56□□□□□ -2.32
LIMK1P53667 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.56□□□□□ -2.32
LIMK1P53667 MIR3612-201ENST00000579753 87 ntBASIC0.56□□□□□ -2.32
LIMK1P53667 SNORA25.7-201ENST00000364375 127 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 RNU6-702P-201ENST00000364982 107 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 RNU6-196P-201ENST00000384315 107 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 MT-TF-201ENST00000387314 71 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 SNORA26.6-201ENST00000391256 115 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.55□□□□□ -2.32
LIMK1P53667 RNU4-71P-201ENST00000516258 113 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 MIR6086-201ENST00000638065 55 ntBASIC0.55□□□□□ -2.32
LIMK1P53667 Y_RNA.294-201ENST00000364916 102 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 Y_RNA.412-201ENST00000384001 104 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 RNU6-643P-201ENST00000384018 107 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 RNU6-679P-201ENST00000391003 106 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 RNA5SP63-201ENST00000391225 112 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 MTND3P2-201ENST00000438452 342 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 RNU7-102P-201ENST00000458948 62 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 RNA5SP285-201ENST00000516619 119 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 MIR4308-201ENST00000580634 81 ntBASIC0.54□□□□□ -2.32
LIMK1P53667 MIR18A-201ENST00000362310 71 ntBASIC0.53□□□□□ -2.32
LIMK1P53667 RNA5SP117-201ENST00000365294 118 ntBASIC0.53□□□□□ -2.32
LIMK1P53667 RNY1P8-201ENST00000383970 114 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms