Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SNORA22.1-201ENST00000362701 134 ntBASIC1.3□□□□□ -2.2
COPAP53621 Y_RNA.114-201ENST00000363265 113 ntBASIC1.3□□□□□ -2.2
COPAP53621 Y_RNA.430-201ENST00000384081 110 ntBASIC1.3□□□□□ -2.2
COPAP53621 AC090844.1-201ENST00000422019 156 ntBASIC1.3□□□□□ -2.2
COPAP53621 RNU6-1211P-201ENST00000459179 105 ntBASIC1.3□□□□□ -2.2
COPAP53621 MIR6516-201ENST00000630554 81 ntBASIC1.3□□□□□ -2.2
COPAP53621 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
COPAP53621 Y_RNA.116-201ENST00000363292 103 ntBASIC1.29□□□□□ -2.2
COPAP53621 Y_RNA.355-201ENST00000365462 98 ntBASIC1.29□□□□□ -2.2
COPAP53621 Y_RNA.508-201ENST00000384502 114 ntBASIC1.29□□□□□ -2.2
COPAP53621 SNORD12-201ENST00000391002 90 ntBASIC1.29□□□□□ -2.2
COPAP53621 RNU6-602P-201ENST00000411155 105 ntBASIC1.29□□□□□ -2.2
COPAP53621 AL022718.1-201ENST00000412004 84 ntBASIC1.29□□□□□ -2.2
COPAP53621 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
COPAP53621 RNU7-21P-201ENST00000459430 62 ntBASIC1.29□□□□□ -2.2
COPAP53621 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.29□□□□□ -2.2
COPAP53621 MIR4305-201ENST00000583252 102 ntBASIC1.29□□□□□ -2.2
COPAP53621 MIR4264-201ENST00000583520 66 ntBASIC1.29□□□□□ -2.2
COPAP53621 AL137067.1-201ENST00000615933 120 ntBASIC1.29□□□□□ -2.2
COPAP53621 Y_RNA.294-201ENST00000364916 102 ntBASIC1.28□□□□□ -2.2
COPAP53621 Y_RNA.366-201ENST00000365540 102 ntBASIC1.28□□□□□ -2.2
COPAP53621 MT-TN-201ENST00000387400 73 ntBASIC1.28□□□□□ -2.2
COPAP53621 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.28□□□□□ -2.2
COPAP53621 RNU7-90P-201ENST00000459216 62 ntBASIC1.28□□□□□ -2.2
COPAP53621 MIR7111-201ENST00000619751 72 ntBASIC1.28□□□□□ -2.2
COPAP53621 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
COPAP53621 RNU6-654P-201ENST00000364373 107 ntBASIC1.27□□□□□ -2.21
COPAP53621 MIR518E-201ENST00000385252 88 ntBASIC1.27□□□□□ -2.21
COPAP53621 RNU6-613P-201ENST00000410412 108 ntBASIC1.27□□□□□ -2.21
COPAP53621 RNA5SP144-201ENST00000410846 116 ntBASIC1.27□□□□□ -2.21
COPAP53621 AC063976.4-201ENST00000421971 163 ntBASIC1.27□□□□□ -2.21
COPAP53621 AL158147.1-201ENST00000443970 75 ntBASIC1.27□□□□□ -2.21
COPAP53621 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.27□□□□□ -2.21
COPAP53621 RNU7-164P-201ENST00000459221 62 ntBASIC1.27□□□□□ -2.21
COPAP53621 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
COPAP53621 RNU6-971P-201ENST00000516920 106 ntBASIC1.27□□□□□ -2.21
COPAP53621 AC027335.2-201ENST00000624030 375 ntBASIC1.27□□□□□ -2.21
COPAP53621 MIR6841-201ENST00000637129 72 ntBASIC1.27□□□□□ -2.21
COPAP53621 POLR2J4-204ENST00000418424 324 ntBASIC1.26□□□□□ -2.21
COPAP53621 AC002429.1-201ENST00000437672 148 ntBASIC1.26□□□□□ -2.21
COPAP53621 RNA5SP404-201ENST00000517118 132 ntBASIC1.26□□□□□ -2.21
COPAP53621 AC108081.1-201ENST00000604358 221 ntBASIC1.26□□□□□ -2.21
COPAP53621 AC012676.2-201ENST00000619258 186 ntBASIC1.26□□□□□ -2.21
COPAP53621 MIR377-201ENST00000362145 69 ntBASIC1.25□□□□□ -2.21
COPAP53621 MIR96-201ENST00000362288 78 ntBASIC1.25□□□□□ -2.21
COPAP53621 Y_RNA.224-201ENST00000364308 111 ntBASIC1.25□□□□□ -2.21
COPAP53621 RNU6-205P-201ENST00000390858 107 ntBASIC1.25□□□□□ -2.21
COPAP53621 RNA5SP95-201ENST00000410319 137 ntBASIC1.25□□□□□ -2.21
COPAP53621 RNU4-61P-201ENST00000411243 107 ntBASIC1.25□□□□□ -2.21
COPAP53621 RNU7-113P-201ENST00000459273 62 ntBASIC1.25□□□□□ -2.21
COPAP53621 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
COPAP53621 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.25□□□□□ -2.21
COPAP53621 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
COPAP53621 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
COPAP53621 RNU6-235P-201ENST00000362644 107 ntBASIC1.24□□□□□ -2.21
COPAP53621 Y_RNA.280-201ENST00000364765 112 ntBASIC1.24□□□□□ -2.21
COPAP53621 SNORA2B-201ENST00000384583 137 ntBASIC1.24□□□□□ -2.21
COPAP53621 RN7SKP19-201ENST00000516016 252 ntBASIC1.24□□□□□ -2.21
COPAP53621 MIR3910-1-201ENST00000580936 111 ntBASIC1.24□□□□□ -2.21
COPAP53621 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
COPAP53621 Y_RNA.191-201ENST00000363972 113 ntBASIC1.23□□□□□ -2.21
COPAP53621 Y_RNA.298-201ENST00000364960 107 ntBASIC1.23□□□□□ -2.21
COPAP53621 SNORD12C-201ENST00000386307 89 ntBASIC1.23□□□□□ -2.21
COPAP53621 AC244023.1-201ENST00000426884 112 ntBASIC1.23□□□□□ -2.21
COPAP53621 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
COPAP53621 RPS23P4-201ENST00000487908 423 ntBASIC1.23□□□□□ -2.21
COPAP53621 RNU6-1061P-201ENST00000516530 99 ntBASIC1.23□□□□□ -2.21
COPAP53621 AC242498.1-201ENST00000604134 111 ntBASIC1.23□□□□□ -2.21
COPAP53621 AC132825.6-201ENST00000638861 357 ntBASIC1.23□□□□□ -2.21
COPAP53621 Y_RNA.168-201ENST00000363740 102 ntBASIC1.22□□□□□ -2.21
COPAP53621 Y_RNA.171-201ENST00000363760 102 ntBASIC1.22□□□□□ -2.21
COPAP53621 SNORD113.3-201ENST00000364630 78 ntBASIC1.22□□□□□ -2.21
COPAP53621 SNORD114-22-201ENST00000365423 72 ntBASIC1.22□□□□□ -2.21
COPAP53621 MIR588-201ENST00000384900 83 ntBASIC1.22□□□□□ -2.21
COPAP53621 RNA5SP237-201ENST00000410414 113 ntBASIC1.22□□□□□ -2.21
COPAP53621 RNU7-62P-201ENST00000458856 62 ntBASIC1.22□□□□□ -2.21
COPAP53621 AC113410.1-201ENST00000505029 247 ntBASIC1.22□□□□□ -2.21
COPAP53621 RNU7-123P-201ENST00000515911 60 ntBASIC1.22□□□□□ -2.21
COPAP53621 RNU2-35P-201ENST00000516446 142 ntBASIC1.22□□□□□ -2.21
COPAP53621 RNY4P20-201ENST00000516678 93 ntBASIC1.22□□□□□ -2.21
COPAP53621 RNU6-789P-201ENST00000517105 102 ntBASIC1.22□□□□□ -2.21
COPAP53621 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.22□□□□□ -2.21
COPAP53621 MIR4452-201ENST00000583004 71 ntBASIC1.22□□□□□ -2.21
COPAP53621 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
COPAP53621 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
COPAP53621 Y_RNA.118-201ENST00000363300 101 ntBASIC1.21□□□□□ -2.22
COPAP53621 RNU6-80P-201ENST00000384195 107 ntBASIC1.21□□□□□ -2.22
COPAP53621 Y_RNA.531-201ENST00000384589 121 ntBASIC1.21□□□□□ -2.22
COPAP53621 snoU13.2-201ENST00000459201 104 ntBASIC1.21□□□□□ -2.22
COPAP53621 AC036111.3-201ENST00000526389 112 ntBASIC1.21□□□□□ -2.22
COPAP53621 AC004812.1-201ENST00000540773 146 ntBASIC1.21□□□□□ -2.22
COPAP53621 RNU6-81P-201ENST00000365608 104 ntBASIC1.2□□□□□ -2.22
COPAP53621 RNU6-959P-201ENST00000384671 107 ntBASIC1.2□□□□□ -2.22
COPAP53621 SNORD111-201ENST00000408139 94 ntBASIC1.2□□□□□ -2.22
COPAP53621 MIR1263-201ENST00000408324 86 ntBASIC1.2□□□□□ -2.22
COPAP53621 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
COPAP53621 RNA5SP136-201ENST00000410906 107 ntBASIC1.2□□□□□ -2.22
COPAP53621 Y_RNA.617-201ENST00000410920 90 ntBASIC1.2□□□□□ -2.22
COPAP53621 AL512326.2-201ENST00000426359 151 ntBASIC1.2□□□□□ -2.22
COPAP53621 RNA5SP33-201ENST00000516687 98 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms