Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR4770-201ENST00000579149 58 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 PISRT1.1-201ENST00000616930 107 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 AC069503.3-201ENST00000618674 145 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 TPTEP1-208ENST00000636884 213 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 MTND5P26-201ENST00000426018 1752 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.14□□□□□ -2.59
NUP98P52948 RNY4P27-201ENST00000363341 96 ntBASIC-1.14□□□□□ -2.59
NUP98P52948 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.14□□□□□ -2.59
NUP98P52948 SNORA18-201ENST00000384416 132 ntBASIC-1.14□□□□□ -2.59
NUP98P52948 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.14□□□□□ -2.59
NUP98P52948 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.14□□□□□ -2.59
NUP98P52948 RNU6-956P-201ENST00000458868 103 ntBASIC-1.14□□□□□ -2.59
NUP98P52948 AC107027.2-201ENST00000512197 115 ntBASIC-1.14□□□□□ -2.59
NUP98P52948 SNORD22.1-201ENST00000516331 125 ntBASIC-1.14□□□□□ -2.59
NUP98P52948 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 RNU6-899P-201ENST00000363947 107 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 RNU6-383P-201ENST00000410864 94 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 AP000533.3-201ENST00000447704 118 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 MIR5591-201ENST00000578248 65 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 MIR1321-201ENST00000637766 79 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.15□□□□□ -2.59
NUP98P52948 RNU6-175P-201ENST00000516896 107 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 AL021707.8-201ENST00000609428 183 ntBASIC-1.15□□□□□ -2.59
NUP98P52948 MIR20A-201ENST00000362279 71 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 SNORD81.1-201ENST00000363064 77 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 RNA5SP403-201ENST00000363598 108 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 MTND3P8-201ENST00000412909 339 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 AC009161.1-201ENST00000417306 376 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 RNU7-45P-201ENST00000459460 63 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 SNORD77.4-201ENST00000516158 81 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 AC006362.1-201ENST00000567392 174 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 MIR5692C2-201ENST00000577959 77 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 AC093424.1-201ENST00000604999 338 ntBASIC-1.16□□□□□ -2.6
NUP98P52948 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 MIR517B-201ENST00000385102 67 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 RNU6-908P-201ENST00000410160 94 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 MIR3145-201ENST00000580727 82 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 AC013791.1-201ENST00000616619 62 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 MIR382-201ENST00000637119 76 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 AC099654.14-201ENST00000638599 341 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 RNA5SP484-201ENST00000458857 111 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 RNU7-169P-201ENST00000459456 61 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 RNA5SP180-201ENST00000516181 101 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 AC073114.1-201ENST00000612027 490 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 AC011476.5-201ENST00000615594 130 ntBASIC-1.17□□□□□ -2.6
NUP98P52948 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 RNU6-888P-201ENST00000363010 101 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 RNU6-431P-201ENST00000383874 107 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 RNU6-900P-201ENST00000384498 102 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 RNU6-264P-201ENST00000517134 104 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 RNU7-35P-201ENST00000517174 62 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 MIR4790-201ENST00000577799 79 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 MIR4724-201ENST00000579485 89 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.18□□□□□ -2.6
NUP98P52948 AC091932.4-201ENST00000623386 200 ntBASIC-1.18□□□□□ -2.6
NUP98P52948 RNU6-451P-201ENST00000362921 107 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 RNU1-141P-201ENST00000364623 158 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 RNU6-510P-201ENST00000391239 108 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 RNU2-55P-201ENST00000411146 174 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 AL445193.1-201ENST00000441183 141 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 MTND3P10-201ENST00000450967 341 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.19□□□□□ -2.6
NUP98P52948 AC022137.1-201ENST00000483735 151 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 U6.109-201ENST00000636749 87 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 RNU6-502P-201ENST00000362419 108 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 SNORD74.6-201ENST00000364796 70 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 TRAJ51-201ENST00000504127 63 ntBASIC-1.19□□□□□ -2.6
NUP98P52948 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.2□□□□□ -2.6
NUP98P52948 RNU6-119P-201ENST00000364882 107 ntBASIC-1.2□□□□□ -2.6
NUP98P52948 AC026421.1-201ENST00000519101 163 ntBASIC-1.2□□□□□ -2.6
NUP98P52948 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
NUP98P52948 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.21□□□□□ -2.6
NUP98P52948 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.21□□□□□ -2.6
NUP98P52948 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.21□□□□□ -2.6
NUP98P52948 MIR617-201ENST00000385030 97 ntBASIC-1.21□□□□□ -2.6
NUP98P52948 RNU2-31P-201ENST00000516954 155 ntBASIC-1.21□□□□□ -2.6
NUP98P52948 MIR3920-201ENST00000581751 86 ntBASIC-1.21□□□□□ -2.6
NUP98P52948 RNU6-308P-201ENST00000390957 107 ntBASIC-1.22□□□□□ -2.6
NUP98P52948 MIR4500-201ENST00000579472 76 ntBASIC-1.22□□□□□ -2.6
NUP98P52948 AC015540.1-201ENST00000615828 501 ntBASIC-1.22□□□□□ -2.6
NUP98P52948 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 AC016907.1-201ENST00000419483 435 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 RPS3AP52-201ENST00000435639 297 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 MTCO2P24-201ENST00000515611 426 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 RNU6-314P-201ENST00000516574 104 ntBASIC-1.22□□□□□ -2.61
NUP98P52948 AP000676.1-201ENST00000533307 52 ntBASIC-1.22□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms